Ciona intestinalis (yellow sea squirt): 100178561
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Entry
100178561 CDS
T01056
Name
(RefSeq) 40S ribosomal protein S2
KO
K02981
small subunit ribosomal protein S2e
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
100178561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cin03011
]
100178561
Ribosome [BR:
cin03011
]
Ribosomal proteins
Eukaryotes
Small subunit
100178561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S5
Ribosomal_S5_C
Motif
Other DBs
NCBI-GeneID:
100178561
NCBI-ProteinID:
XP_004226053
Ensembl:
ENSCING00000019985
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Position
5:complement(2221123..2224830)
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AA seq
278 aa
AA seq
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MADAAAPAGGSGTRGGFRGGFGGRGRGRGRGRGRGRGRGRGKEDEKSWVPVTKLGRLVKD
GMIKSLEEIYLFSLPIKEFGIIDDLIGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAVGD
SNGHVGLGVKCSKEVATAIRGAITLAKLSIIPIRRGYWGNKIGKPHTVPCKVHGKCGSVH
VRLIPAPRGTGIVSAPVPKKLLSMAGLEDCYTSARGQTATLGNFAKATFNAISKTYSYLT
PDLWRDQPLTKAPYQEYTDHLEKNHTSGGVQKQEVKKY
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcagcagcaccagccggtggatcaggaactcgtggaggatttcgaggagga
tttggaggtaggggccgcggtcgtggcagaggaagaggccgtggtagagggagaggacgt
ggaaaggaagatgaaaaatcttgggtaccagtaacaaaactgggaagattggtcaaagat
gggatgatcaagtccttggaggagatctatctcttctctcttccaatcaaggagtttggg
atcattgatgatttgatcggaagctctcttaaggacgaagtgctcaagatcatgcccgta
caaaagcagacacgtgccggacaacgtacacgtttcaaggcttttgttgctgttggagat
tccaacgggcatgttggtttgggtgtcaaatgttccaaggaagtagcaaccgctattcgt
ggagcgattacactcgccaagctctccatcatccctattcgacgtggttactggggaaac
aagatcggaaaaccacatactgttccatgcaaagttcatggaaaatgtggtagtgttcac
gtacgtttgatcccagcacctcgtggtacaggcatcgtctctgctcccgtacccaagaag
ttgttgagcatggctggtcttgaggattgttacacttctgcaagaggacagaccgccaca
ctcggaaatttcgctaaggccaccttcaatgctatctccaagacctacagctaccttacg
cctgacctatggcgtgaccagccactcacgaaagcgccataccaagagtatactgaccac
cttgagaagaaccacaccagtggtggagtacaaaagcaagaagtcaagaaatactaa
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