Ciona intestinalis (yellow sea squirt): 100178567
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Entry
100178567 CDS
T01056
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit
KO
K12670
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit DDOST/WBP1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00510
N-Glycan biosynthesis
cin00513
Various types of N-glycan biosynthesis
cin01100
Metabolic pathways
cin04141
Protein processing in endoplasmic reticulum
Module
cin_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
100178567
00513 Various types of N-glycan biosynthesis
100178567
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100178567
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GFIT
Motif
Pfam:
OST48_N
OST48_MD
DUF2194
Motif
Other DBs
NCBI-GeneID:
100178567
NCBI-ProteinID:
XP_002124569
Ensembl:
ENSCING00000005044
UniProt:
F6SM47
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Position
3:complement(1082327..1087003)
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AA seq
438 aa
AA seq
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MKQSYFCLVLLACLAFVWSKQNKKTLVLYDNSDIKTTHSIFFKSLSDRGFDLTFKSADDA
SLELIKYGVQLYENLIIFSPSVEDFGGGIKVSTITDFVDGGGNVLVAADSSIGDPIRELA
SECGVEFDEERTKVIDHHNFDESDRGSHTKLVVDPSNLIKSENIVGKPKSPILFNGIGMV
LDQENPLVLPIMKGSATCYSYFTDDKIEQYPLGVGTNTVLVAGLQARNNARLVFAGSLQM
FSDDYLTSGVKQDSPGSKAFAKSGNADFVITLSKWVFSESGVLRVGKINHHKLGEKVAPD
AYTITDMVHFSIVIEERTIDGKWKPFKGDDVQMEFVRIDPFVRLPIKLNPKLGAFTIDFK
LPDVYGVFQFKIDYSRLGYTFLKSATQVSVRPLQHTQYERFISSAYPYYASAFSMMLGVV
IFSVFFLYHDDAKKVKSE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaagttatttctgtttggtattgcttgcctgccttgcgtttgtgtggtcgaag
caaaacaagaagactttggttttatatgacaattctgatatcaaaactactcattcaata
ttcttcaaatctttgtcggacagaggttttgatttaacgttcaaatccgctgatgatgcc
agcttggagttgatcaaatatggggtgcaactttatgaaaatcttattatattttcccca
tcagttgaagattttggtggtggcatcaaagtttcaacaatcacagattttgtagatggt
ggaggtaatgttttggtagcagctgattcaagcatcggtgatccgatcagagaacttgct
tctgaatgtggagtggagtttgatgaggagcgaaccaaagttatcgatcatcataacttt
gatgaaagtgatagaggatcgcatacaaaacttgttgttgatccgagcaacctcattaaa
tctgaaaacattgtggggaaaccaaaatcaccaatcttatttaatggaatcgggatggta
cttgatcaggaaaacccacttgttctaccaataatgaaaggttcagcaacttgctactcc
tactttactgatgacaaaattgaacaatatcctcttggagttggtacaaacactgtgtta
gttgcaggattacaggctcgcaacaatgcacgtcttgtatttgctggttcacttcaaatg
ttcagtgatgattatttgacttctggagttaaacaggattcacccggttcaaaggcgttt
gcaaaatctggcaatgctgactttgtaatcaccctttctaagtgggtgttttcagaaagt
ggtgtgttacgagttggaaagattaatcatcataaattgggagagaaagtcgcacctgat
gcttacaccatcacagatatggtgcacttcagcattgtaatcgaagaacgtactattgat
ggaaaatggaagccgttcaagggtgatgatgtccagatggaatttgttaggattgatccg
tttgtgagattacccatcaaactcaatccaaaacttggagcttttaccattgattttaaa
ctacccgatgtgtatggtgttttccaatttaaaattgattactccagattaggatacaca
tttttaaagagtgccactcaagtttctgttcgcccattgcagcacactcagtatgagaga
tttatatcatctgcatacccatattatgccagtgcattcagcatgatgcttggtgttgtt
atcttctctgtgttcttcctttaccatgatgatgcaaagaaagtcaaatctgaataa
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