Ciona intestinalis (yellow sea squirt): 100178580 Help Entry 100178580         CDS       T01056                                  Name (RefSeq) host cell factor 2-like   KO K14966   host cell factor 1 Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin03083   Polycomb repressive complex cin04980   Cobalamin transport and metabolism Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09126 Chromosome    03083 Polycomb repressive complex     100178580  09150 Organismal Systems   09154 Digestive system    04980 Cobalamin transport and metabolism     100178580  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:cin01009]     100178580   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:cin03036]     100178580    03029 Mitochondrial biogenesis [BR:cin03029]     100178580 Protein phosphatases and associated proteins [BR:cin01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      100178580 Chromosome and associated proteins [BR:cin03036]  Eukaryotic type   Histone modification proteins    HAT complexes     NSL complex      100178580    HMT complexes     COMPASS/SET1 complex      100178580     MLL-HCF complex      100178580    Polycomb repressive complex (PRC) and associated proteins     PR-DUB complex      100178580 Mitochondrial biogenesis [BR:cin03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     100178580 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Kelch_HCF Kelch_KLHDC2_KLHL20_DRC7 Beta-prop_FBX42 Beta-prop_ATRN-LZTR1 Kelch_1 Kelch_2 fn3 Kelch_FKB95 Pentapeptide_2 Motif Other DBs NCBI-GeneID:  100178580 NCBI-ProteinID:  XP_018668531 LinkDB All DBs Position 1:6244698..6255214 Genome browser AA seq 1355 aa AA seqDB search MAAPSVKWNRVTNSSGPIPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTVTNQWFI PAVRGDIPPGCAAYGFVCDGTRLLVFGGMIEYGRYSDDLYELQASRWEWKKLSPRPPHNG PPPLPRLGHSFTLVGDQIFLFGGLANESDDPKTNIPRYLNDLYTLELRNLNAISWEVPPT YGSPPPPRESHTAVAWKDSNGHQRLIVYGGMNGSRLGDLWMLDVGPMSWSCPIVPSSGPS PLPRSLHSAICIDDKMYVFGGWVPLVIDEMKPSSHEKEWKCSDTLATYNLKTLSWEPVSI EIVEDTAPRARAGHSCVNINSRMYLWSGRDGYRKAWNNQVCCKDLWFLETKKPPAPSRVQ LVRASTHTLEVSWGPVAIADAYLLQIQKYEIVNKSPPPPKVSAPLPQTSAAQLVNTTPRL ASPLPITSTQANPNITGIAALAAAAAASQGTVNKAPGLPSNVPMISSTTNPVPTGLISTE GQHQQVTVMKPANVQHTRQVFTMKKGPVTQVVTTVIGGVTKTITLLKTPITSLPKQSGGS IVKLVSSGNTSSINRPISIMTSQLGGATGQPSILKTIPIINKTGANTTKLVSINTKVITP GVGTKILTSNPQGMKVISNVAGMQRIIVTPKPKPLVTVQQAQPSVAAITSALPARITPPP PVVVQTPSAPSPTLKEATNPPQVPKPPEIVKESDPKPVAVATDGSTISNTAPPVSSLKPE EAEPPVPMETEPDNSKPEESTKPSSPEVLNLPKISEANNSTKPSTVQTNIAQTDTTAAGN TETGNTETGNTETGNTETGSTETGSTETGSTETGNTETGNTETGNTEAGNTEAGNTEAGN TEAGNTDAGNTETGNTETGNTENTKTENTKTDNSETGNTQTGNTQTGNTQTGNTETGNTD TGNTETGNTDTGNTGTGNTGTGNTETGSSKVDTLCSKMEIKSQNVKDEEEKMEVGNSDDI IKSKDQSSSAMDVDGEDANVKKGLEVNEAEKINDDKETKMDEDLQPEQTNQTINTECKSP PHETTTTNQTDSTITATAGTTDPTSTTTMVSGGSMASGSEQQPPTTTSECETPPHETATT NQTDSTKTVSASDQSTRTTPSTIIPVPMSAPEQPPTPVSVTPPVTEAAKSDVPPKVDHVW HDVAIVKSSSLIVNQYLEKVEQPEPDAVDVVNIPDQNGVLRKVSLEPGTAYKFRVAAINE CGRGPFSDVSAFKTCLPGFPGAPSAIKISKTMEGASISWEPPTSTNGTIQEYSVYLAVKS SQARQNPNNMQFVRVYLGSLPRCVVPHAHLGSAHIDCSTKPAIIFRIAAKNQKGYGPATQ VRWLQDASKVDTQRQAFKRTVPGQESSVKKSRLEV NT seq 4068 nt NT seq  +upstreamnt  +downstreamnt atggcggcgcccagtgtaaagtggaatagggttacgaattccagtgggccaattccacgg ccacgtcatggacatagagcagttgcaatcaaagagcttatggtcgtatttggaggagga aacgaaggtattgtcgacgagctacatgtttataacacagtgaccaaccaatggtttatt cctgctgtaagaggagatattcctcctggttgtgcagcgtatggctttgtgtgcgatgga accaggttgctggtgtttggtggtatgattgaatatggaagatattctgatgatctttat gagttacaggcaagcagatgggagtggaagaaattgtctcctcgtcctcctcataacgga cccccgcctcttccaagattaggacacagttttacgcttgtgggcgatcagatttttcta tttggaggacttgctaatgagagcgatgatccaaagactaatattccgagatatttgaac gacttgtatacacttgaacttcgaaatctaaatgccatctcatgggaagtcccccccact tatgggtctcctccacccccacgcgagtcgcatactgccgtggcttggaaagactccaat ggtcatcagcgactcatcgtttatggaggaatgaacggatctcgacttggagatttatgg atgcttgacgttggaccaatgtcgtggagctgtcctattgtaccttcatctggaccaagt ccattaccacgcagtctgcacagtgcaatctgtattgatgataagatgtatgtgtttgga ggttgggtaccactcgtaattgatgagatgaaaccatcaagtcatgagaaggaatggaaa tgcagtgatactcttgccacttacaacctcaaaaccttatcctgggaacctgtttcaata gagattgtagaagatactgctcctcgtgccagggcaggccactcttgtgttaatatcaac tcgcgtatgtatctatggagtggcagggatggttacaggaaagcatggaacaaccaagtt tgctgcaaagatctttggttccttgaaacaaagaaaccaccagcgccatcacgtgtccag cttgtccgagcttccacccacaccttggaagtatcgtggggacccgttgccattgcagat gcttaccttctacaaatacaaaaatatgagattgtcaacaaaagtccacccccacccaaa gtttccgctccccttccccagacttctgcagcacagttagtgaacaccacaccacgcctt gcttccccactccccataacttccacacaagcgaaccccaacataaccggcattgctgct cttgctgctgctgctgccgcatcccaaggaacagtgaacaaagcacctggtctcccaagc aatgtaccaatgataagttccactacaaacccagttccgactggtttaatctcgacagaa ggtcaacatcaacaagtgacagtaatgaagccagccaatgtacaacacacacggcaggtc tttacaatgaaaaaaggtcctgttactcaggtcgtgaccaccgtaattggaggagtgacc aaaacaatcacgctgctcaaaacaccaatcaccagcttacctaaacaaagtggtggatct attgttaaactggtttccagcggcaacacgagttcaatcaatcgaccaatctctattatg acgtcacagttaggtggcgccaccgggcagccttctattctcaagacaatcccaatcatt aacaagacgggtgccaacaccacgaagcttgtgtcaatcaacactaaagttataactcct ggtgttggaactaagatacttacctccaacccacagggcatgaaagtgatatctaatgtg gcagggatgcaacgaatcattgtaactcctaaaccaaagccactggttactgtacaacaa gcccaaccctctgtagcagcaataacatcagcattaccagccagaatcaccccaccccca cccgtggtggttcagactccatcagctccttccccaaccctcaaagaagcaactaacccc ccacaagttccaaaaccaccagaaattgttaaagaatcagatccgaaaccagttgcagtt gctactgatggcagcacaatctccaacactgctcctcctgtttctagtttgaaacctgag gaagcagaacctcccgttcccatggaaacagaacccgataattcaaagccggaggaatcc acaaaaccatcttcaccagaagtccttaacctgccgaaaatttcagaagcaaataattcc actaaacccagcaccgtacaaaccaacattgctcaaactgacacaacagcagctggcaac actgagactggcaacactgagactggcaacactgagactggcaacactgagactggcagc actgagactggcagcactgagactggcagcactgagactggcaacactgagactggcaac actgagactggcaacactgaggctggcaacactgaggctggcaacactgaggctggcaac actgaggctggaaacactgacgctggaaacactgaaactggaaacactgaaactggaaac actgaaaacactaaaactgaaaacactaagactgacaactctgagactggaaacactcag actggaaacactcagactggcaacactcagactggcaacactgagactggcaacactgac actggcaacactgagactggcaacactgacactggcaacactggcactggcaacactggc actggcaacactgaaactggaagctctaaagttgacacgttatgtagtaaaatggaaatt aaaagtcaaaatgtaaaagacgaagaagagaagatggaggttggaaacagtgatgacatc attaaatccaaagatcaatcttcgagtgcgatggatgttgatggagaagatgcaaatgtg aagaaagggttggaagtaaatgaagctgagaaaattaatgatgataaagaaaccaaaatg gatgaagatttacaaccagagcaaacaaatcaaacaataaatacggagtgtaagagtcca ccacatgaaaccaccactaccaaccagacagattctacaataactgccacagctggtaca actgaccccacatcgaccactaccatggtatctggtggttccatggcttctggttcagaa caacaaccaccaacaaccacaagtgaatgcgagaccccaccccatgaaaccgcaacaacc aatcaaactgacagcacgaagactgtttcagcatctgaccaatccacacgtactacccca tctactattatccctgtgcctatgtctgccccagaacaacccccgacacctgtgtccgtt accccaccagtcacagaagcagcaaagagcgatgttccaccaaaagtggaccatgtgtgg catgatgtggcgatagtgaagtcttcatcactcattgtcaaccaatacttggagaaagtt gagcaacccgagccagatgcagttgatgttgtaaacataccagatcagaatggagttctt agaaaggtttccctggaaccaggtacagcatacaagttccgcgttgcagcaatcaacgaa tgtggtcgtggtcctttctctgatgtttcagcatttaaaacatgtctgcctggtttcccc ggagctccatctgctatcaaaatcagcaagaccatggaaggtgcttcaatatcttgggag ccacccacgagcacaaatgggacgatacaggaatactcggtctacttagctgtgaaaagt tcacaagcaagacagaatccaaataacatgcaatttgtgagggtgtacctgggaagtttg ccaaggtgtgtggttcctcatgctcaccttggttcagcacatattgactgctccaccaaa ccagccatcatattcaggatagcagcaaagaaccaaaaaggttacggaccagctacccaa gtcaggtggctacaagatgcttcaaaagttgacactcaaaggcaagcctttaaacgcact gttccagggcaagaaagttctgtgaagaagtcaagattagaagtttaa

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