Ciona intestinalis (yellow sea squirt): 100178583
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Entry
100178583 CDS
T01056
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100178583
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cin01007
]
100178583
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100178583
03029 Mitochondrial biogenesis [BR:
cin03029
]
100178583
Enzymes [BR:
cin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
100178583
Amino acid related enzymes [BR:
cin01007
]
Aminoacyl-tRNA synthetase
Class I (A)
100178583
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100178583
Prokaryotic type
100178583
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
100178583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
100178583
NCBI-ProteinID:
XP_002129278
Ensembl:
ENSCING00000005113
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MSASNFIELNKLLSRQSYLGGWNPTAQDYKVLSELPSQLPAELIHLKRWKTHLTVSETLK
NKFPTKLSGTSSKMPTQQHLSPEEKKSLITRNLQEVLGEDKMTEILQTRDLKVYWGTATT
GKPHVAYFVPMSKIGDFLKAGCEVTILLADLHAYLDNMKAPWDLLVLRSKYYEHVIKAML
RSIGVPLEKLKFVQGTDYQLSREYTLDVYRLSSVVTEHDAKKAGAEVVKQVEHPLLSGLL
YPGLQALDEEYLKVDAQFGGVDQRKIFTFAEKAMPALGYTKRIHLMNPMVPGLTGTKMSS
SVEESKIDLLDDPAAVKRKLKKAFCEPGNVENNGVLSFVKSVVFPILGEIEIVRKEEYGG
NVNYTEYEKLVDDFAKEAVHPGDLKASVVVIINKLLQPIQEEFKNPELIKLTKEAYPPPQ
KTKTKPSSKSKSTPTPNTDELNPNRLDLRVGQIIKAEKHPDADSLYLETIDFGEESGPRT
VVSGLAGLVPLEALQGRLIIGLCNLKPQKMRGIESQAMLLCASIKSETSKEVEPLDPPAG
STAGDKVFIEGVNQVTPDERLNPKKKVWEKLQVDLLVTKEGIATWQGKNIVTSKGSITAA
NLRGSSIS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctagtaattttattgagttgaataaattattatcaagacagagttacttaggt
ggttggaaccctactgcacaagattacaaagttttatctgaactgccatctcagttgcca
gcagaactaattcatctaaaaaggtggaaaactcatcttacagtttcagaaacattaaaa
aataagttccccacaaaattatcaggcacatcatcaaaaatgccgactcaacaacattta
tcaccagaggaaaagaagtcactcatcaccagaaatttgcaggaggtcttaggagaagac
aaaatgacagaaattctacaaacacgagatttaaaggtttactggggtacagctactaca
gggaaaccccatgttgcatattttgtacctatgtcaaaaattggggactttcttaaagca
ggttgtgaggtgacaatcttgttagcagacttgcatgcttatttagacaacatgaaagca
ccctgggatttactggttcttagatccaagtattacgagcatgtaataaaagccatgcta
cgctccattggtgttcccttggaaaaactgaagttcgtgcaaggtacagactaccaacta
agccgagaatatactttggacgtttacagactttcttctgttgtaaccgagcatgacgct
aaaaaagctggcgctgaagttgttaaacaagttgaacatccgttgcttagtggtttgctc
taccctggattgcaggctttagatgaagaatatttaaaagtggacgcacagtttggtggt
gttgaccaacgcaagatattcacatttgctgaaaaggcaatgccagctttgggttatacg
aagcgaatccatcttatgaaccccatggtccctggtcttactgggaccaagatgagttct
tctgttgaggaatctaaaattgatctcctcgatgacccagccgctgttaaaagaaagttg
aaaaaggctttctgtgagccaggaaatgtagaaaacaatggagttctttcatttgtaaag
tctgtagtcttcccaatacttggagagattgagattgtacgtaaagaggaatacggtgga
aatgtcaattacaccgaatatgagaaattagtggatgattttgcaaaagaggcagtccac
cctggtgacttgaaagcatcggtagttgtgataataaacaaactgcttcaaccaattcaa
gaagaatttaaaaacccagaacttatcaaattaaccaaagaagcctacccacctccacag
aaaactaaaaccaaaccctcctcaaagtcaaaatccaccccaaccccgaacactgatgag
ctaaaccctaacagattggatttgagggttggacaaattattaaagcagagaaacatcca
gatgctgactccctttatcttgaaacgattgactttggtgaagaaagtggtccacgaact
gtcgtgtcaggattagctggtcttgtaccactagaggcactacagggcagattgattatc
ggcttatgtaacttgaagccgcaaaaaatgaggggaattgaatcgcaagctatgctgcta
tgtgcaagtattaagtctgaaacaagcaaagaagtagaaccacttgacccaccagcaggt
tccactgcaggtgacaaagtatttattgagggggtgaatcaagtcacaccagatgaaagg
ttgaacccaaagaaaaaagtttgggaaaaacttcaggttgatttattagtcactaaagaa
ggaattgcaacgtggcaagggaagaatattgttacgtcaaaagggtcaataacagcggca
aatttacgtggttctagtattagttaa
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