Ciona intestinalis (yellow sea squirt): 100178586
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Entry
100178586 CDS
T01056
Name
(RefSeq) translocation protein SEC62-like isoform X1
KO
K12275
translocation protein SEC62
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03060
Protein export
cin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
100178586
04141 Protein processing in endoplasmic reticulum
100178586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100178586
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cin02044
]
100178586
Membrane trafficking [BR:
cin04131
]
Autophagy
ER-phagy
ER-phagy recepters
100178586
Secretion system [BR:
cin02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
100178586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec62
DEP
OPT
DUF6183
Motif
Other DBs
NCBI-GeneID:
100178586
NCBI-ProteinID:
XP_002125213
LinkDB
All DBs
Position
1:7484289..7490200
Genome browser
AA seq
367 aa
AA seq
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MASLFGLPIVPEVRKDENKPDVDDECSKSTGNFQAQSEEPSKEELQMAKHVRFKTPKKNT
IMQKQKVDYFVGSKAVDTLMNSKWAKSSKKGDAIISSREEAIIFMEKLLCSNLFYRVEKI
LKETKADKEKKNLKSKENEEDSKVKKRKKDKKVEENEKKETDEKKKKRKYKLQAHEEQVF
YDSSDIYVWLYDPISPKTWFLGGVLLLGVIAATLFPIWPPSVRVGVYYLTVVGGFFVGGI
LGTALLRTILFGVIYVFTLGTHHLWVLPNLLEDVGFYDSFKPLYTYEYKGSKQETKESNE
DEEEEKEDQDEKDDKEEPKDDPIKSEEEEKIARSTDEFSDESEPELEVQYEDSDYEIIDG
KVPAKEE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtttatttgggttgccgattgtccccgaagttaggaaagatgaaaataaacca
gatgttgatgacgaatgttcaaaaagtaccggcaattttcaggcacagagtgaagagcca
agcaaggaggagttacaaatggccaaacatgttcgttttaagacgccaaagaagaacaca
attatgcaaaagcaaaaagtggattattttgttggttccaaggcagtggacacgctaatg
aattcaaagtgggcaaaatcttcaaaaaagggggatgctattatatccagcagagaagaa
gcgattatttttatggagaagttgctttgcagtaatctattttatcgagttgaaaaaatc
ttgaaagaaacaaaagccgataaggaaaagaaaaatcttaaatcaaaagagaatgaagag
gattcaaaggtgaaaaaaagaaaaaaggacaagaaagtggaagagaatgagaaaaaggag
accgatgaaaagaagaagaaaagaaaatataaacttcaagctcatgaagagcaagtgttt
tatgattcttctgatatctatgtttggctgtacgacccaattagccccaaaacatggttt
ttaggtggcgtgcttcttctgggagtcattgctgcgacgctctttcctatttggccacca
agtgtcagagttggtgtgtattatctgacagttgttgggggattttttgttggaggaatc
cttggcactgcactattgcgaaccatattatttggagtaatatacgttttcactttgggc
acacaccatttgtgggtcctccctaatttactggaggatgttgggttctatgattcattt
aaacccctgtatacttatgaatacaagggctccaagcaagaaactaaagaaagtaatgag
gatgaagaagaagagaaagaggatcaggatgaaaaggatgacaaagaagaacctaaagat
gatccaatcaaatcagaagaagaagaaaaaatcgctcgctccaccgatgaattttcggac
gaatccgaaccagaacttgaggttcaatatgaagacagtgattatgagatcatagatggt
aaagtgcctgccaaagaagagtag
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