Ciona intestinalis (yellow sea squirt): 100178587
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Entry
100178587 CDS
T01056
Name
(RefSeq) serine/threonine-protein phosphatase alpha-2 isoform
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100178587
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
100178587
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cin03021
]
100178587
03019 Messenger RNA biogenesis [BR:
cin03019
]
100178587
03041 Spliceosome [BR:
cin03041
]
100178587
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100178587
Protein phosphatases and associated proteins [BR:
cin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
100178587
Transcription machinery [BR:
cin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100178587
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100178587
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100178587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
100178587
NCBI-ProteinID:
XP_026694931
Ensembl:
ENSCING00000004542
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MSDPDKLNVDKIIAMLLEVRGSRPGKNVQLSENDIRGLCLKSREIFLSQPILLELEAPLK
ICGDVHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETIALLLAYKIKYPENFFL
LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPLAAIIDEKIFCCHGGLSPDL
QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKEVSGWGENDRGVSFTFGPEVVAKFLHKHD
LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSD
KKKYPYGGMVSGRPVTPPRAGAAKSKPGKK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatccagacaaattaaatgttgataaaattattgccatgttgttagaggtgcga
ggttctcggccggggaaaaacgtccaactttcggagaacgacattcgtggtctttgttta
aagtcaagggagatatttctaagtcaacctattctacttgaattagaagctcccctaaaa
atatgtggtgacgtccacgggcaatattatgatttgttgaggttgtttgaatacggaggt
tttccaccggagtcgaattatcttttcctcggagattatgtcgatcgtggaaaacaatcc
ttggaaacaatagctctgttgctcgcttacaaaataaaatatccggagaatttcttcctt
ttacgaggcaaccatgaatgtgcgagcatcaacagaatatatggtttctatgatgaatgt
aaacgaaggtacaacatcaagttgtggaaaacattcaccgattgtttcaactgtcttcca
ctggctgcaataattgatgagaagatattctgctgtcatggagggttatcccctgacctt
caatcaatggaacaaatccgtcgtataatgcgtcccacggatgttcccgaccaaggcctc
ttgtgtgacctcttgtggtcagatcctgacaaggaagtatcaggttggggtgagaacgac
aggggggtgagttttacattcggacccgaagttgttgcaaagtttcttcacaaacatgac
cttgacctcatatgtagggctcatcaggtagttgaggacggatacgaattcttcgcgaaa
cgtcaactcgtcactttgttctcggcccccaattattgcggggagttcgacaacgcaggg
gccatgatgagcgtggatgaaaccttgatgtgttcgttccagatattgaaaccatctgac
aagaagaagtatccatacggtggcatggtgtcaggtcgtcctgtgaccccgccacgagcc
ggagccgcgaaatctaaacctgggaaaaagtaa
DBGET
integrated database retrieval system
