Ciona intestinalis (yellow sea squirt): 100178592
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Entry
100178592 CDS
T01056
Name
(RefSeq) dynein regulatory complex subunit 6-like
KO
K10279
dynein regulatory complex subunit 6
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100178592
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100178592
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100178592
Cilium and associated proteins [BR:
cin03037
]
Motile cilia and associated proteins
Nexin-dynein regulatory complex
100178592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
LRR_At5g56370
F-box
LRR_14
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
100178592
NCBI-ProteinID:
XP_002130800
Ensembl:
ENSCING00000007416
LinkDB
All DBs
Position
8:4404319..4413559
Genome browser
AA seq
798 aa
AA seq
DB search
MASLQGIDGKLKEYIRVHQLPDVYECLLTGLIVLCPEDPLKWIVQSIKKIQVQGLYNVSW
DMFVPPDSRPNVRQMTESYLDEIFLFGEGTVPSTEMYASAYNHYNTKMMSMCFRGWMKYY
LDRKHRKGRMLRKLQEARRYYRHRIMRIHLSRWTSWKTFVKDRQERGFAIVVSICNESSC
RLIFRAWRAVAVDARKTREYFERLERGELDEDCDTEDGIPTDTFRDDISLLPRKCAIQIF
SFLDLMDLGRCARVCRAWKVITGAPTLWSHLNFSKVRSNVTDKMVIQCLQKCRPYLVHLN
LQQCYSVHWPTFKSISECRNVQDLNFSECKGVNDEVMRTIAESCPTLLYLNISHTEITDG
TLRTLSRCCLNMQYLSLAYCSKYTDRGLHYMASGKGCRKLTYIDFSGCLQITAQGFRHVA
HGCTSLQSIVLNDMPSLTDSCIISLVEKCTNLRSVSLIGSPNLTDMAFKALAQAKKLQKL
RIESNQNITDNTFKTLGKMCPYIGHFYVVDCQRLTDMMLKALSPLRSIIVLNLADCVRIS
DSGVRQMVEGPSGSKIREMNLTNCVRVSDVSLLRVAQRCHSLTHLCLCFCEHVTDAGIEL
LGSMPALLHVDLSGTNIKDQGLASLGVNSRIRSVVMSECQGITDLGLQKFCQKVTELDTL
DVSHCMSLSDAAIKNLAFCCRMLTSLNVAGCPLLTDLSIQYLSGVCHYIHFLNLSGCIHI
SDRAVKYLRKGCKQLRSLTILYCRSITKITAQRLASRIEHVEYNSDRVPSWFNYDDSPSR
RGNQIEGNNSKWIEFEDA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctccaagggattgatggaaaattgaaagaatatattcgcgttcatcagctt
cccgatgtttatgagtgtttattgacgggtctcatcgttttatgtcctgaagatcctttg
aaatggatagtacagagcattaagaagattcaagtccaaggactctacaatgtttcatgg
gatatgtttgttccacctgattcaagaccaaacgttcggcaaatgactgaaagttatctt
gatgaaatattcttatttggggagggaactgtgccatcaacagagatgtacgcatctgca
tacaaccattataatacaaagatgatgagcatgtgttttagaggatggatgaagtattat
cttgatagaaaacataggaaaggaagaatgttaaggaaactgcaagaagcaagaagatac
tacaggcacagaatcatgagaatccaccttagcagatggacatcgtggaaaacttttgta
aaagacaggcaagagagaggatttgcgattgttgtctcgatttgcaacgaatcgagttgt
cgtctcatcttccgtgcgtggagagcagttgccgtggatgcgaggaagaccagggagtat
tttgagaggttggagcgaggagagctggatgaagattgtgatacagaggatggtattcct
actgatactttcagagatgacatatcgttgctaccacggaaatgtgcaatccaaattttt
agctttcttgacctgatggacttaggtcgatgtgcacgagtttgtcgagcgtggaaagtt
ataactggagctccaacattgtggagccatcttaacttctctaaagttcgatccaatgta
actgacaagatggtgatacaatgtcttcaaaaatgccggccataccttgtacatcttaac
cttcaacaatgctactctgtccactggccgacatttaaatcgatttctgaatgtagaaac
gtgcaggaccttaacttctctgaatgtaaaggtgttaatgatgaagtgatgcgtacaata
gcagagagttgtcccacccttctctaccttaacatatcacacactgagataacggatgga
acattacgtacattatcacgatgttgccttaacatgcagtacctcagccttgcctattgc
tccaaatacacagacagaggtcttcattacatggcaagtggaaaggggtgtcggaaatta
acgtacattgatttttctggttgccttcaaataactgcacaaggattccgtcacgttgca
cacggttgtaccagccttcaatccattgttcttaacgacatgccttctttaaccgattcc
tgcattattagcctggttgaaaaatgcacaaatctccggtcggtgtcgctgataggctcc
cccaacctaacagacatggcttttaaagctcttgcacaagccaagaagctgcagaagcta
cgaatagaatcgaaccaaaacatcaccgacaatacgttcaagacattgggcaaaatgtgt
ccatacatcggtcacttttacgttgttgattgccaaagactcacggacatgatgctgaaa
gctctctcccctttgcgaagtatcattgtccttaacttagctgactgcgttcgcatcagc
gattctggggtgaggcaaatggtcgagggaccttctggttccaagatccgtgaaatgaat
ctcacaaactgtgtaagagtgagtgacgtgtctctgctccgtgttgcacaaaggtgccac
agtctcacacatctgtgtctttgcttctgtgagcatgttactgacgctgggatcgagtta
cttggcagcatgcctgcgctattgcacgtcgatctatccggtaccaacattaaagaccaa
ggccttgcctcgctaggcgtgaacagtcgtatccgttccgtcgttatgtcagagtgtcag
ggcatcaccgatctggggttgcagaaattctgccaaaaggtcaccgaactcgacaccctt
gacgtatcgcactgtatgtccctcagcgatgcagcgatcaagaatcttgctttctgttgc
cgcatgctcacttcattaaatgttgctggttgcccgttgcttacggacttaagcatacag
tatctatctggtgtgtgtcattacattcactttctcaatctttctggttgtattcatata
agtgatagggcggtcaagtatctgcgaaaaggatgcaaacagcttcgtagtcttactatt
ctctactgcagaagcattaccaaaatcacagcacagcgattggctagtcgaattgaacat
gtagagtacaacagtgaccgtgtaccttcctggttcaattacgacgactcgccttcgcgc
cgaggaaaccaaattgaaggaaacaactcgaaatggattgaatttgaagacgcttga
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