Ciona intestinalis (yellow sea squirt): 100178631
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Entry
100178631 CDS
T01056
Name
(RefSeq) 2-hydroxyacyl-CoA lyase 1
KO
K12261
2-hydroxyacyl-CoA lyase [EC:
4.1.2.63
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100178631
Enzymes [BR:
cin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.63 2-hydroxyacyl-CoA lyase
100178631
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_M
TPP_enzyme_N
TPP_enzyme_C
CO_dh
Motif
Other DBs
NCBI-GeneID:
100178631
NCBI-ProteinID:
XP_002132188
Ensembl:
ENSCING00000006732
LinkDB
All DBs
Position
2:complement(7350366..7356037)
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AA seq
582 aa
AA seq
DB search
MSDENVMVTGAEVYARALKIQGVEYVFGIVGVPIMEVAMAIQQVGLKFIGMRNEQSAAYA
AGAIGYLTGRPGACLVVSGPGLIHALGGMANAMENCWPMIVLGGSSDEDQQAMGAFQEYP
QVEACRLYSKFAARPTSITIIPEIIEKAVRTSIYGRPGACYVDIPGNFVNASVKLGDCRF
RSECPPPPRSLADPTSISSAANLMLAAKRPLIIIGKGAAYARAEDEVRRFVEDHNLPFLP
TPMGKGVIPDDHELCVSAARSRALLNCDVIVLLGARLNWQLHFGRQPRFNKDVKVIQVDI
CAEELHNNVQSTVALLGNIPNVIQQLIEHSKKTHRGVPWRLSKDSDWWKFLQEKIDSNAV
STKALAEDKSVPLNYYAVFDVLTKHLPKDCIIISEGANTMDISRTMILNYLPRHRLDAGT
FGTMGVGLGFAVAASLYSLDIAKKTGMPPQKVVCIQGDSAFGFSGMELETVCRYNLPLVF
VVVNNNGIYSGGNKDFWEAIKMSGDIAVHAPPTFLTPESKYEKLIEAFGGEGHSCVTADQ
LDESFKRCMSRSSEQASLINVMIDTTSARKEQEFTWLTRSKM
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgaaaacgttatggtcactggagcagaagtatacgcgcgggctttgaaaatt
cagggagtggaatatgtgtttggaatagttggtgttccaatcatggaggttgccatggca
atccagcaggttgggttaaagttcattggaatgaggaacgagcaatcagctgcttatgcc
gcaggggccattggttatctaactgggagaccaggtgcttgcttggttgtttctggcccc
ggtttgatccatgcattaggaggtatggcaaatgcaatggaaaactgttggccaatgata
gtgttgggaggctcatctgatgaggatcagcaagctatgggagcttttcaagaataccca
caggttgaagcatgcaggttgtacagcaagttcgctgcacgccctaccagtatcactatc
ataccagagataatagagaaggctgttagaacttcaatatatggaagacctggtgcgtgt
tatgtggatatacccggtaactttgtcaatgcttcagtaaagctgggagactgcaggttc
cgatctgaatgcccacccccaccacgaagcttagcagacccaacttccatatcttcagct
gctaacctcatgctcgctgccaagaggcctctcataatcatcgggaagggagcagcttat
gcaagagcagaagatgaagtgaggagatttgtggaggatcataatcttcctttcctccca
actcctatggggaagggagtgatccctgatgatcacgagctctgtgtttcagctgccaga
tcaagagctctgcttaattgtgatgtcatagttcttcttggtgctcggctaaactggcaa
ctgcatttcgggaggcagcctcgttttaacaaggatgttaaggtgatccaagtcgatatc
tgtgcggaggaattacacaacaatgttcaatctactgtggctttgttaggaaacattcca
aatgtgatacagcagcttattgaacattcaaagaaaactcaccgtggagttccatggagg
ttgtccaaggattctgattggtggaaatttctgcaggaaaagattgacagcaatgctgtg
tcaactaaggcattggcggaagacaagtctgtgcctttgaactattatgctgtgtttgat
gtattgacgaaacatctgcctaaggattgtattataataagtgaaggggcgaatacaatg
gatattagcaggaccatgatattaaactacctaccaaggcacagattagacgctggtacg
tttggaacaatgggagttggtttggggttcgctgttgctgcaagtttgtactcgctggac
attgccaaaaaaactggcatgccaccacagaaagtggtttgcatacaaggagacagcgca
tttggtttctcaggcatggagttggaaaccgtgtgtcgatacaaccttccacttgtgttt
gtggttgtaaacaacaacggaatctactcaggcggaaacaaggatttctgggaagcgata
aaaatgtccggagacatcgctgtacacgccccccccaccttcctcacacctgagtcgaaa
tacgagaagttgattgaagcgtttggtggggaaggtcactcgtgcgtgacggccgatcag
ctggacgaatcattcaagcgttgcatgtcacgctccagtgagcaagcgagtctcattaac
gtaatgattgacacgacgtcagcgaggaaagaacaggagtttacttggctgactagaagc
aaaatgtga
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