Ciona intestinalis (yellow sea squirt): 100178689 Help Entry 100178689         CDS       T01056                                  Name (RefSeq) integrin alpha-8 isoform X1   KO K06481   integrin alpha 2 Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin04145   Phagocytosis cin04512   ECM-receptor interaction cin04518   Integrin signaling cin04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03271 Virion - Rotavirus     100178689  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100178689    04518 Integrin signaling     100178689  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     100178689   09142 Cell motility    04820 Cytoskeleton in muscle cells     100178689  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cin04147]     100178689    04515 Cell adhesion molecules [BR:cin04515]     100178689    04090 CD molecules [BR:cin04090]     100178689 Exosome [BR:cin04147]  Exosomal proteins   Exosomal proteins of colorectal cancer cells    100178689   Exosomal proteins of bladder cancer cells    100178689 Cell adhesion molecules [BR:cin04515]  Integrins   Integrin alpha subunits    100178689 CD molecules [BR:cin04090]  Proteins   100178689 SSDB OrthologParalogGFIT Motif Pfam:  FG-GAP VWA Integrin_A_Ig_3 FG-GAP_3 Integrin_A_Ig_1 Integrin_A_Ig_2 VWA_2 B_solenoid_dext Phylloplanin Motif Other DBs NCBI-GeneID:  100178689 NCBI-ProteinID:  XP_002124191 Ensembl:  ENSCING00000002936 LinkDB All DBs Position Unknown AA seq 1306 aa AA seqDB search MRELLKFILICAVLFWQSEAYFLEVRENATNAINFNNTIDVKTTNGALPGYALIASMEQN VISLLAGAPKFSGLYNVGSTGDGAVIKCSANVQPFSSTTKAGNTKWMTDHGCSVVLNTNA VPTGDNQNKSADAIGMTMIPLGGNKTAVCSPGRRKICGRSLRLSPGACYTGTLGAAMTMK TGWGEIPCFKNYLDLVYVVDSSNSISDANFTIMKQIIVNASEAFEASIGDTTQVAVLQYG NLDSAAFDHTDSKYYKSPTKLGDCNDIDCFNRAIKANMTHLNAANTFTSLAIRRAVEFDF AQSKNKDKAKKILVLITDGQANFQSQLIVSYRLTQSHNITVYAIGVALKSDAELRISANG GVSKERVLDANNYSELSKALRNLTETIAQSSGEGQATGGITLENAVLGVSANYNPKGGKL FFSGVGSYDGSGAIIKYDSISSTKGDVTSHKQVPGLFPKFPKDSYLGYSIASGYFEGNGT LYVATGAPRHALLGLVLVYEPQTDNSVSNPRIIKPNNCSSCSTNYKQLGSYFGATLLSAD INGDGKDDLLVGAPLYIGDNYDEGRVFVYLSQASNSIQAWASSGFVPKVFSGMKDVGGRF GSAISSAGDLNDDGFNDVIIGAPLADNGAGVVYVYHGSNNLKTVYSQRIQSSSLQFPHLS NFGLSTSSGADLDGNKYPDVVVGAPNSNLAIIFRSRPVARFSAQITLSPPRRDIFECLQL PSRKCFNVTSCLTVYGKSVEDFLDVNVMILLDKSKKRLNLGGFNNATKEVKLSRNVTSCW SYDVYVTKNMIDFVSPLSAEVQYSLTSTHSNTPMSSMVDPAATNKVSTTASFNTGCTSDL FCSYDLMVNSSITLPKTTNQELNSKLGSDVIIIDKDTATKPIILHVTISNVGENAYGVKF DVTYSSSLIWNGIKEANILNHRNASCFDEVSTQDQTHGQLKIKSLTYKYNEDLGSIMPAG DSCSFEIHLLPTNLKTSGVIQNVYAALHVYTMYAPNGNDSNPTNNVANYTRTIRYVSDVS VTRRESTQFVTREFTFPKTNETVHSVYEIGRNVSTIAVAYEISSEGYSVVPSSSFFLRYP TNISEHNLLYLYKVSCIGSQGPVMCNCSTQNVNRYHLSTSPNTTDKSGPSILLLPNPTQL PLSLYNCSSSIVDPPAYCEELHCSVNNLVQGSKVNFVASFRFWSHSVKLVDYPTVTFVTG FSYTTNQSKLVINKNGSIITEYSAETEVAVKKYVPPVVIEQLNLLLIVIISAAVTLLLVI AGLGALYKKGFFESEYNKLMKEEKHWQKGNATQERTDEVYDEDLKQ NT seq 3921 nt NT seq  +upstreamnt  +downstreamnt atgagggaattattaaagttcatattgatttgtgccgttttgttttggcaaagtgaagca tattttcttgaagtgcgagaaaatgcgacgaacgctattaattttaacaatacgattgac gttaaaacgaccaacggagcgttacctggatacgctttgattgcatcaatggaacaaaac gttatcagtttgttagcgggtgcgccaaagttcagcgggttgtataatgttggatccact ggtgatggggccgtcattaaatgttcagctaacgtccaaccgttctcttcaacgaccaaa gcaggaaacacgaaatggatgaccgatcatggctgctctgttgtattgaataccaacgca gtcccgaccggcgataatcaaaacaaatctgcagacgccattggaatgactatgataccg ttagggggaaataaaacagccgtttgttcgcccggaagaaggaagatatgtggacgtagt ttgaggttatccccgggtgcatgttacacaggaacgcttggagctgctatgactatgaaa acggggtggggagagataccatgttttaagaactaccttgaccttgtctatgtagtggac agttcaaattccatatcagatgcaaattttaccatcatgaaacagattattgtcaatgct tcagaagcttttgaagcaagcattggtgatactacacaagtcgctgtattgcaatacggg aacttagattcggcggcgtttgatcacacggattcaaaatattacaaatcaccaacaaaa ctcggagattgcaatgacatcgattgttttaaccgagccatcaaagctaacatgacacat ctaaatgcagcaaacacttttacaagcttggcaataagaagggcagtagagtttgacttt gcacaatcaaaaaacaaagataaagcaaaaaagattttagttcttataactgatggtcaa gcaaactttcaatcccagttgattgtgagttatagattaacacaatcgcacaacatcacg gtttacgccatcggtgttgctttaaaatctgatgcagagcttcgtataagtgcaaatggt ggtgtaagtaaagaacgagtattggatgctaataactacagtgaactatcaaaagctcta cgaaatttaacggaaacaattgctcagtcaagtggagaaggtcaagccactggtggtatt actctggaaaatgcagtgcttggagtttctgctaactataatccaaagggaggaaaatta tttttcagtggtgttgggtcttacgatggttcaggtgcaataataaaatatgattcaata agcagcaccaaaggtgatgttaccagtcataaacaagtcccaggactctttccaaagttt ccaaaagattcttatttaggctattccattgcttctggctactttgaaggaaatggcaca ctgtatgtagcaactggagcaccaagacatgcactactaggactggttcttgtgtatgag cctcaaactgacaacagcgtcagtaaccccagaatcatcaaaccgaataattgttcttcc tgctcaactaactacaaacaacttggaagttattttggcgcaacattgctctctgctgac atcaatggtgatggaaaagatgatttacttgttggggctcctctatatatcggtgataat tatgatgaaggaagagtctttgtttatctctctcaagcttcaaactccatacaagcttgg gcgagttcagggttcgtaccaaaagtattttccggaatgaaagatgtgggtggtcgattc ggttcagcaatttcatcggcaggagatcttaacgatgatggttttaatgatgtcataatt ggtgcaccgctggcggacaatggggcaggagttgtgtatgtttatcacggctcaaacaat ttgaaaactgtttatagccagagaatccaatcttcatcattgcaatttccacatctttca aactttggattgtcaacttcatctggtgcagatcttgatggaaataaatatccagatgta gtggtgggggcaccaaatagcaatttagctattatattcagatctcgccctgttgctcga ttctcagctcaaataactttgagtccaccaagaagagatatatttgaatgtttacaattg ccaagtagaaaatgttttaatgttacttcatgtttaacagtttatggaaaatcagttgaa gattttcttgatgttaatgttatgatcttgctcgataaatccaagaaacgtttaaatctt ggtggttttaataatgcaaccaaagaagttaaattgtcgcggaatgtcacgagttgttgg tcatatgatgtttatgtaacaaaaaatatgatagattttgtcagtccgttatctgctgag gttcagtattctcttacttctactcacagcaacacacctatgtcctctatggttgatccg gctgcaaccaacaaagtgagcacaactgccagttttaacactggatgtacaagtgatcta ttttgttcatatgatttgatggtaaatagcagcattacactacccaaaactacaaatcag gaattaaatagtaagctcgggagcgatgtgatcattattgataaggacactgctacaaag ccaataattttacatgtgaccatttctaatgttggtgagaatgcatatggtgtgaaattt gatgtaacttattcatcttcacttatatggaatgggataaaagaagcaaacattttaaac cacagaaacgcaagttgttttgatgaagtgagtacacaggatcaaactcacgggcaattg aaaatcaaatctttgacttataaatataatgaagacttaggaagcatcatgccagctgga gattcgtgttcatttgaaatccacctcctaccaaccaacctcaagacaagtggagtcata caaaatgtgtatgccgcactacatgtatacacaatgtatgctcctaatggtaatgacagc aatcctacaaacaatgtggcaaactacacacgcacaatacgttatgtatctgatgtatcg gtaaccagaagagagtctacccaatttgtgactagagaatttactttccccaaaacaaat gagacggtgcattctgtttatgagattggtagaaatgtctctacaatagctgttgcatat gagatatctagtgaaggttattctgttgtcccatcgtcaagttttttccttcgttaccca actaacatatcagaacataatcttctctatttatacaaagttagctgcattggatctcag gggccggtaatgtgcaactgtagcacgcaaaatgttaacagatatcatttatctacctca cccaataccacagacaaatctggtcccagtatcctgttgttgcctaaccctacacaactt ccactgtctttatataactgttccagcagcatagttgatccaccagcatactgtgaagag ctgcactgttcagtaaataatcttgttcaaggatctaaagttaactttgtagcaagtttt agattttggtcgcattctgttaaactcgttgattatcccactgttacttttgttactgga ttttcttacacaacaaatcagtcaaagttggttatcaataagaatggatcaataatcaca gaatattctgctgagacagaagttgctgtgaagaagtacgttccacctgttgtaatagag caactaaaccttttgttgatcgttattatatctgctgcagttactttgcttcttgttatt gcgggtcttggagcattgtacaagaaaggatttttcgaaagtgaatacaacaaattaatg aaagaagaaaaacattggcagaaaggtaatgctacacaagaaagaactgatgaggtgtat gatgaagatttaaaacaatag

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