Ciona intestinalis (yellow sea squirt): 100178709
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Entry
100178709 CDS
T01056
Name
(RefSeq) tubulin alpha chain, testis-specific-like
KO
K07374
tubulin alpha
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04145
Phagosome
cin04517
IgSF CAM signaling
cin04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100178709
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100178709
09142 Cell motility
04814 Motor proteins
100178709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100178709
03036 Chromosome and associated proteins [BR:
cin03036
]
100178709
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100178709
04147 Exosome [BR:
cin04147
]
100178709
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100178709
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
100178709
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
100178709
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100178709
Exosomal proteins of other body fluids (saliva and urine)
100178709
Exosomal proteins of colorectal cancer cells
100178709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
100178709
NCBI-ProteinID:
XP_009858084
Ensembl:
ENSCING00000000546
UniProt:
F6QB20
LinkDB
All DBs
Position
3:complement(5589078..5592873)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEHVDTVLD
RIRKLSDQCSGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTA
VVEPYNSVLTTHTTLEHSDCAFMVDNEATYDICRRNLDVERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVSEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGIDSVDEENDEDDEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagagaatgcatttcaatccacgtcggtcaagctggtgtccagatgggcaatgcatgt
tgggagttgtattgcttagagcacggcatccaacccgatggtcagatgccgagtgacaag
acaattggagggggtgacgattcgttcaacacctttttcagtgagacaggagccggaaaa
catgttccaagagcagtttttgtcgatcttgaaccgactgttgttgacgaaatacgtacg
ggaacgtacaggcaactgtttcatccagagcagttgatcaccggcaaagaagatgccgca
aacaactacgcccgtggccactacactgtcggcaaagaacatgttgatactgtccttgat
cgcatccgaaagctttcggatcaatgcagtggcttgcagggatttttgatctttcattcg
tttggtggtggcactggatccggatttacgtcgttgttaatggagagactttccgtcgat
tacggaaagaaatcaaagctggaatttgcaatctacccagcaccgcagatttccaccgcc
gtcgttgagccgtacaactcggtcctaacaacgcacacgaccttggagcattcggactgc
gcgtttatggttgacaacgaagctacctacgatatttgcagaaggaatttggatgtcgaa
agacccacctacacaaaccttaaccggttgattggccagatcgtttcatccatcacggct
tcgctgcgtttcgatggcgcattaaacgtggatttaacggagttccaaaccaacttggtg
ccatacccacgtattcactttccattggtcacgtatgctccagtcatttccgctgagaaa
gcttaccacgaacaattatccgtctctgagatcaccaactcgtgtttcgaaccagccaat
cagatggtaaaatgtgacccacgccatggaaagtacatggcatgttgtcttttgtaccgc
ggtgatgttgtcccgaaggacgtcaacgctgctattgctgcaatcaaaaccaaacgaaca
attcagttcgtcgattggtgtcccactggtttcaaagttggtatcaactaccaaccacca
accgttgtaccaggtggtgacttggcgaaagtccaacgtgcggtttgtatgttgagcaac
acaacagcgattgccgaggcttgggctcgtctggaccacaagttcgacttgatgtacgcc
aaacgtgcattcgttcactggtatgtcggtgagggaatggaagaaggagaattctccgaa
gctcgcgaggatctcgctgctctggagaaagattatgaagaagtcggcatcgattccgtc
gatgaagagaatgacgaagacgatgaatattga
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