Ciona intestinalis (yellow sea squirt): 100178713
Help
Entry
100178713 CDS
T01056
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 17-like
KO
K15133
mediator of RNA polymerase II transcription subunit 17
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cin03021
]
100178713
Transcription machinery [BR:
cin03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Head
100178713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med17
Motif
Other DBs
NCBI-GeneID:
100178713
NCBI-ProteinID:
XP_026693944
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MSNPLNVKISLQPLSETKIQEIAYNGRETFIPPLSMSESLTDLANRINFLAEDESDVDQD
VERKLTPGKQWPWENIRSHLQSALIEMNVLVDVMAIAQNKDSTSKDKQESTDPNRYLMFS
SVAKEAETPKPMLQMITKKRCLGAAGKILLDGAERLNKARNEVSTQQNFHAQLLKLRQRW
RVRRHGDKILGDLSYRTAGSDFLHHGSFEVVKVSADDMDHDVGNENLPLRVVMSPDLKGR
STISVMIIDTSGTDYITDMASLNYNDEVGFNTSSMHDPSWHKKLCQAQNVLYCKELFAHL
TKEAVQYKNVGAIAPIVVIKDTISTEIFPSIRLVVKLIHSMDTDNQQSQTENPSALETVF
SLKFTLLQLLQEVHRRKLEISPPRPTSAVLGLTPHMRRAAVQGNTLKQLTLASDKNNISF
IESLLKMAKHHVVRKRVVSLIQTVTKSFQDPDVQAHWSTIGNMFESSVRILIASSGFESC
YRTVVQLTLYSDHIKALQREGRVLTLSTEYSDLYLYFITLISSHQLQTVQALSKILNWSL
LHMAPHAGVCINNSVINRGTMLLASPSNDSKLSLSITHNTDHSISHNVRIQFSKSLDLKL
NNQVFTETQDNLTLSSKYLGLGGEWKIVNWQNLHGRHFVQKMETLLTSLVSNF
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatccactaaacgtaaagatttctttgcaacctttgtctgaaacaaagattcaa
gaaattgcgtataatggccgtgagacgtttattccacccctctccatgtccgagagcttg
acagatcttgcaaaccgaatcaactttttagctgaagatgaatcagacgtagatcaggat
gtcgagagaaaactcaccccaggcaagcagtggccatgggaaaatataagatcgcattta
cagagtgcgctgattgaaatgaatgtgttggttgatgtgatggccatcgcacaaaataag
gacagcacgtccaaagataaacaggaatcaaccgacccaaatcgttacttgatgtttagc
tctgttgctaaggaagcagaaacacccaaacccatgttacaaatgataactaaaaaaagg
tgcttaggagctgctgggaaaattcttttagatggagcagaaagactaaacaaagctaga
aacgaagtttctactcaacaaaactttcacgcacaactgctcaagttaagacaaagatgg
agagtacgtagacacggagataaaattcttggggacttgagttacagaacagctggttct
gacttcttgcatcatggctcatttgaagttgtgaaagtatcagcggatgatatggatcat
gatgttggaaacgaaaatctcccgctgcgtgttgtgatgagtccagatttgaaaggaaga
tcaacaatatccgtgatgatcattgacacttcaggcacagattatatcacagacatggca
agccttaactataatgatgaagttgggtttaatacttcaagtatgcacgacccatcctgg
cataagaagctttgccaggctcagaatgtattgtattgtaaagagctgtttgcacatttg
accaaagaagctgtgcagtataagaatgttggtgcaattgcacccattgttgtgataaag
gacacaatttctactgaaatattcccatccatccgattagtagtaaaactcattcattct
atggatactgataaccagcaaagccaaactgaaaatccatctgcattagaaactgtcttc
agtttaaagttcaccttgctacaacttttgcaagaagtgcatcgaagaaaactagaaata
tcgccacctcggcctacaagtgcagtgctagggttgacgccacatatgcgaagagcggca
gttcaaggtaacaccttgaaacaattgacattggcatcggataagaacaacatatcgttc
attgaatctttgttgaaaatggcaaaacatcatgttgtgcggaaacgagttgtttcattg
attcaaaccgtcactaaatcgtttcaagatccagatgtacaagcacattggtcaactatt
ggcaacatgtttgaatctagcgttcgaattttaattgcgagttctggttttgaaagttgt
taccgcaccgttgtccagcttacattatattctgatcacatcaaagcgttgcagcgtgag
ggtcgtgtactaacgctttcaacagaatattcagatctctacctttactttataacatta
atatcatcacaccagctacaaacggttcaagcactttcgaaaatattaaactggtcatta
ttacacatggcacctcatgcaggggtgtgtataaataacagcgttataaaccgaggaacg
atgttgcttgcttctccatccaatgatagcaagttatcactcagtattacccacaacaca
gaccactcaattagccacaatgtccgaatccaattctcaaaatctcttgatttaaagtta
aataatcaggtcttcacggagactcaagacaaccttactttgagttcgaaataccttggg
ttgggaggagaatggaaaatagttaactggcaaaatttgcatggccggcattttgtgcaa
aaaatggaaactttattaacaagtttggtttctaatttttaa
DBGET
integrated database retrieval system
