Ciona intestinalis (yellow sea squirt): 100178737
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Entry
100178737 CDS
T01056
Name
(RefSeq) LOW QUALITY PROTEIN: katanin p60 ATPase-containing subunit A1-like
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100178737
Enzymes [BR:
cin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
100178737
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
100178737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_14
TIP49
AAA_33
AAA_7
AAA_16
Mg_chelatase
AAA_17
AAA_22
NPHP3_N
AAA_2
AAA_28
IstB_IS21
nSTAND3
TPR_1
AAA_24
RNA_helicase
PhoH
TsaE
SRPRB
AAA_18
Parvo_NS1
MHCassoc_trimer
Motif
Other DBs
NCBI-GeneID:
100178737
NCBI-ProteinID:
XP_009862197
LinkDB
All DBs
Position
1:complement(2817504..2819343)
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AA seq
486 aa
AA seq
DB search
MGREYALLGNYDTALVYYQGVLQQIQKHLQTLRDAETRSLWQGVRQDLAQECEYVKDITA
TLASFKVDGNYMAPSQRGGGSAFEEPTRDPDVWPPPTPAEPPQRAPVNKRNPPRGINARP
SPNQAPDRRAAARNNPSSVNQRQADHKRPTDKVKKVGRSGSPKRQQGGNDNKEEKRFDPT
GYDKDLVEALERDIVQRNPNVHWSDIAGLTEAKKLLEEAVILPLLMPDFFRGIRRPWKGV
LMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLSSKYRGESEKLVRLLFEMARFYSPSTI
FIDEIDSIGSKRGSGDEHETSRRVKAELLIQMDGVEGATGGDDAAKMVMVLAATNFPWDI
DEALKRRLEKRIYIPLPESEGRESLLKINLKEVELADDVNLALIAEKLEGYSGADITNVC
RDASLMAMRRRIAGLKPDEIRNLSQSELHLPTTGEDFTEAMRKVSKSVSSQDLEKYEKWM
KEFGAA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgggacgggaatatgccctgcttgggaactatgacaccgctttagtttactaccaaggt
gtccttcagcaaatacaaaagcatttacaaactctccgtgatgctgaaactagaagctta
tggcaaggcgtgcggcaagatttagcgcaagagtgcgagtatgtaaaggatataactgca
accctcgccagctttaaagtagatggcaattacatggccccgtcccaacgtggaggggga
agcgcgtttgaagagcccacacgagatccagacgtttggcccccacctacacctgcggag
cccccacaaagagctcctgtgaacaaaagaaatcccccaagaggaataaacgcccgtcca
agtccaaaccaggcaccagatcggcgtgcagcagcaagaaataatcccagttccgtaaac
caacgccaagctgaccataaacgacctacggataaggttaaaaaggttggtcgttcagga
tcacctaaaagacagcaaggagggaatgataataaggaagaaaagcggtttgatccaact
gggtatgataaagatttagttgaagctttggagagagatattgttcaacggaacccgaat
gttcattggagtgacattgctggtctgactgaggcaaagaaattgcttgaagaagctgtt
attttacctttacttatgccggactttttccggggcattcggagaccttggaaaggtgtt
cttatggtgggaccgcctggtactggaaagactttactcgccaaagctgtggctactgaa
tgtaaaaccacgttctttaacgtttcctcttctactttaagttcaaaatacagaggggaa
tctgagaaattggttcggctactgtttgagatggctcgattttattctcccagcacaatc
tttattgatgaaattgactccattggcagcaagcgtggatctggtgatgaacatgagaca
agtagacgtgtgaaggcggaactgcttatacagatggatggggtagaaggtgctactggt
ggggacgatgctgctaaaatggtcatggtgttggctgctacaaattttccttgggacatt
gatgaagctctaaaaagaagactggaaaagaggatctacatccctcttcctgaatccgaa
ggaagggagtcgctcctgaagattaatctgaaagaggtggagctcgctgatgatgtgaat
cttgctctgatcgcagagaagttggaagggtattcaggagcggatatcaccaatgtttgc
agggatgcttcactgatggctatgagaagaagaattgcaggtttgaaacccgatgaaatt
cgtaatttatctcaatctgaactgcacctgccgacaactggagaagattttaccgaagca
atgagaaaagtttcaaagtcggtttcttcccaagatttggagaagtatgagaagtggatg
aaagagtttggagcagcttaa
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