KEGG   Ciona intestinalis (yellow sea squirt): 100178760
Entry
100178760         CDS       T01056                                 
Name
(RefSeq) partner of Y14 and mago-like
  KO
K14294  partner of Y14 and mago
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03013  Nucleocytoplasmic transport
cin03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100178760
   03015 mRNA surveillance pathway
    100178760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cin03019]
    100178760
Messenger RNA biogenesis [BR:cin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     100178760
SSDB
Motif
Pfam: Mago-bind Androgen_recep MerR-DNA-bind
Other DBs
NCBI-GeneID: 100178760
NCBI-ProteinID: XP_009858089
Ensembl: ENSCING00000006448
LinkDB
Position
3:5742398..5743535
AA seq 219 aa
MSSQQHNLKISQATGIVRDDRGVAFIPATQRPDGTWRKAQRVKEGYVPDEDVKRYETSRA
RNRRNAPACPGLSPDFVAPIQTKKSVPGFSSSSTDVELPLSKGAKKNLKRKEQRLKKKGE
QNEVLIQQQYNDLVTGDKNVSEITEKLATSHVSSSNASSLTDTEAAAKKIKNLKKKIRQI
DDLKAKIDSGEISKPDKTQLEKIQKRQEIIDELNKLESS
NT seq 660 nt   +upstreamnt  +downstreamnt
atgagtagccaacaacacaatcttaaaatatcacaagccactggaatagttcgagatgat
cgaggtgttgcttttatacctgccacccaaagacctgatggtacatggagaaaagcacaa
agagtaaaagaaggttatgttccagatgaagacgtaaagaggtatgaaacttctcgtgct
cgcaatagaagaaatgctccagcttgtcctgggttgagtcctgattttgttgccccaatt
caaaccaagaaatcagttcctggtttcagttcttcttccactgatgtagaacttcctcta
agcaaaggagcgaagaaaaatctcaagcggaaagagcagaggttgaaaaagaagggcgag
caaaatgaagtcctcattcagcaacaatacaatgatttagtcacgggtgataagaatgtt
tctgaaatcacggaaaaattagctacaagccatgtctcttccagcaatgcctcctcactt
actgacactgaagcagctgcaaaaaaaattaagaatttaaaaaagaaaattcgtcagata
gatgacttgaaagcaaaaatcgattctggagagatatcaaaacccgacaaaacgcagctt
gagaaaatacaaaaacgtcaagaaattattgatgaactaaataaattagagtcttcatga

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