Ciona intestinalis (yellow sea squirt): 100178767
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Entry
100178767 CDS
T01056
Name
(RefSeq) sodium- and chloride-dependent GABA transporter ine
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100178767
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100178767
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100178767
NCBI-ProteinID:
XP_002122771
Ensembl:
ENSCING00000004705
UniProt:
F6QN34
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Position
3:complement(4481066..4485872)
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AA seq
587 aa
AA seq
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MVQQKHEEAVRVERGEWKSKSQFLLACVGYAVGLGNIWRFPYLCFKSGGGAFIIPYLTML
VLCGIPLLYLEMAIGQYTRYGPVHALEMICPLMKGVGLATVVISFILCTYYNVVITWAIY
YFFNSFNANLPWQSCNETWSSPNCSVSSNDTANNWTVSSTQDFFDQVVLKKTEGIHDMGN
MQWKVFGCFVLAWVLCYLCISKGIKSVGKVVYATATFPYLILIILLVVGCTLPGARSGVI
YFIKPVWSELLNVEVWVNAAAQNFNSIGIAFGSLIAFSSYNRRDNNILRDTLCIACINSG
TSLLAGFVIFSAMGHMAHVLGKEVAQVATEGPELVFIVYPQIFSNLPVPQLWSAIFFLML
ICMGIDSQFAMIEVVNTTLSDVWDGKLLTKYFKRKELLALFVCVIAFLIGIPNLMQGGIY
VFTLLDNYTAIVSLMFLAFFEVVAICWIFGGRRVAKCVKEMTGTAPSKFFVVCWVVCAPL
LIGVILIFSIVKYKPAHYGSYVYPAWADGLGWLVALCSMLCVPIGALVTILSLKGSFWQR
LKLSIIPRLKTDEFDDDVMKSVSSKESDSPPPYATETATFLSNNTKV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaaaagcacgaagaagcggtacgcgttgaaagaggcgaatggaagagcaaa
tcacaatttctgctcgcgtgtgttggatatgcagttggtcttggaaacatatggaggttt
ccatacctttgtttcaaaagtggcgggggcgcatttataattccgtatctgacgatgctg
gtgttgtgtggtatcccactgctttatttagagatggcaattggtcaatacacacgttac
ggaccagtacacgcattggaaatgatatgcccacttatgaaaggagttggccttgcaact
gttgtaatcagctttatcctatgcacatactacaatgttgtaattacatgggcaatatat
tatttcttcaattcattcaatgctaatctcccatggcaaagctgcaacgaaacatggagc
agcccaaactgcagtgtttcttcaaacgacaccgccaataactggacagtgtcttcaaca
caagatttttttgaccaagtggtgctaaagaaaacagaaggtatacacgacatgggaaac
atgcaatggaaagtatttgggtgctttgtactagcatgggttctatgctatctttgtata
tcaaagggaattaaatctgttggaaaggtagtatacgcaaccgccacgtttccttatcta
atccttatcatattacttgtggttggttgcacactacctggtgcacgctctggtgtcatc
tactttattaaacccgtttggagcgagttactcaatgttgaggtatgggtgaatgctgct
gctcaaaacttcaactcgattggaattgcttttggttctctcatcgcgttttcaagttac
aatcgccgtgacaacaatatcttgcgcgacactttgtgtatcgcgtgtatcaacagtggg
acaagcttgcttgcagggtttgtcatattctccgcaatggggcatatggcgcatgtcctt
ggtaaagaagttgcccaagttgcgactgaaggaccggaacttgtttttatcgtttatcct
caaatcttctccaatcttccagttccacaactctggtcggcaattttctttctaatgttg
atttgcatgggtattgacagtcagtttgctatgattgaagttgtcaacacgacgctgtca
gatgtttgggatggaaaactgctgacaaaatactttaaaaggaaggagttactcgcactt
tttgtctgcgttatcgcattcttgatcggcattccaaatctcatgcagggcggaatttac
gtattcacgcttctggacaactatacagcgatcgtgtcactcatgttccttgctttcttt
gaagtggtagcaatctgttggatatttggtggacgtagagtagcaaaatgtgtcaaagaa
atgactggcactgcaccttccaagtttttcgttgtttgctgggtcgtatgtgctcctttg
ctgattggagttattcttatattcagtattgtgaagtacaaacctgctcactatggttcc
tatgtttaccccgcttgggcagatggtctcggatggcttgtagcgttatgttcaatgctt
tgtgttccaattggggcccttgtcacgattttgagtttaaagggttcattttggcaacgg
ctcaagctatctattattccacgtttaaaaactgatgagtttgatgatgatgtgatgaag
tcagtttcgagcaaagaatctgactcccctccaccctatgcaacagagactgcaacattt
ctttcaaacaatacgaaagtttag
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