Ciona intestinalis (yellow sea squirt): 100178816
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Entry
100178816 CDS
T01056
Name
(RefSeq) receptor-type tyrosine-protein phosphatase kappa isoform X1
KO
K06776
receptor-type tyrosine-protein phosphatase kappa [EC:
3.1.3.48
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
100178816
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
100178816
Protein phosphatases and associated proteins [BR:
cin01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
100178816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
Fn3_PTPRU
MAM
Ig_DSCAM-DSCAML_C
PTP-SAK
DSPc
Tc-R-P
Pur_ac_phosph_N
PTPlike_phytase
Ig_3
Y_phosphatase3
Ig_2
PTP-NADK
I-set
PTP_tm
TMEM154
Stevor
ig
Ddi2_HDD
RIFIN
Motif
Other DBs
NCBI-GeneID:
100178816
NCBI-ProteinID:
XP_002125715
Ensembl:
ENSCING00000002433
LinkDB
All DBs
Position
Unknown
AA seq
1516 aa
AA seq
DB search
MIMDVTVVLLLLHLASMTRGLPAYGSCNFDEADYSCGYTQEVDDNFDWLKQNNVDGGYFM
EVETENHIRNQKAVFTSPQIVQQDTHCFSFKYHLEGSGVVTDGNGSSPLGTLPTASGRLS
VYVRNDNTDTLLQPVWTTPELGGTDGWATVHLALNPLAYRVSFEATVLQDIPGVIAVDNI
VVSSKPCDSTPHFLRLGNKDVNKGQNVSLKCLLWGHSGPDQVILMQKSSGETITRSTRKV
LDDHLSVTFNFTNVDLHESGKYRCISQEATKVGVSNYAQLSVRKPPRPTRGPMVSEPGST
SFMIQLNIDEFTGDGPIVQTILKYRPVDGLWADVHHITNEDYQLWHLQPDTEYEVSVTLV
RPGVGGAGPPGPTLRRKTKCGVPLQALQNVIPTPVGSNEIQVTWNVPDFSIVQCHFYQFV
VKYRIYDENEPQEGANEYLQLEVQQTPSASILDLRTFTRYAIKVSLVTSGGSIDTGDYIM
RTGEGAPSEVPPQSFVTTFINETSIALKWAEPTPPNGEIIGYEVSYRGTRSFDPTFQAQN
DNGLIQEGGDKRGLVLTGLHPGTRFAISIRAHTKAGVSNGTEIIASTDISAPTMPRYPNP
FDSSNKTITPTTIEITLKPADANGAPITNYYIIIEDVTPKPKTPSKPAAPSSVRNKKNSG
KGNKRKRKNRNRNTRSLDALWRHKRQAVVAVSDEPNACLSQPITFEEAQRTNRSSYAGAR
FAPSEVTQDMKFMVGGSSDTNGFTNPPLDPNKDYKIYVRAESNVGGEVKANCVLVALKDH
KIVTPTTRPTQPTMENTKTVQQDNGSTAIATPGDRDASQQEQVMLYAAVGGAVVAVLVIS
IVVILLAIKFKRRRKRLHKDEVVNPFEVRMMISDVSTPGHTLLPTNHGEGSVERRALMPD
VVGYEHQAYNGLYYIEKASENGASYPPAPSSDERFAVRVDDFHVHVSQMKATGGYGFREE
FSTFVDGPAAPWTVAEKPQNRIKNRYGNIMAYDHSRVVLEPLPGHEEEYGSDYINASYVN
GYKKPGMYIATQAPTSDTSADFWLMVWQERSNIIVMVTNLVELGKRKCHQYWPDETGVYG
SIQVSMNNVEETSDYVVRSFVVQQTDGYDVREGKQFHFTSWPDHGVPSRPTNLLSFVRRV
KSYDPQGEGPTLVHCSAGSGRTGCFMVIDMMLDMARDEDIVDIHNTVKEVRTRRVNMVQT
EEQYIFIHEAVLEALLCGETSVPAGDLVQHYDELITVDPQTHFAPIQEEFETLNVITPKL
SEDECSVARLPRNRGANRFMDVLPADRHLAYLVTPDPADRENNYINAVYVDSYSSKNEFL
VTQMPLPNTVIDIWRLIYDHNCSSIVMMNDVTEHDQTCRQYWPDQGSAIYGSFTVELLTK
DDEVDVVTRLFKLQNIARPGDGYRLVQQFQLTNWPAPQPVPYSRNSVLRIIQLISKWQSE
CSVNHEPGRALVHCVAGAGRSGSFIACYNMCEQLRNEYSVDVFNIVQRLRNVRPQLVETL
EQYRFCYEVGIEFADQ
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgattatggacgtaacagtagttctattattgctacatctcgcatctatgacgaggggt
ctcccggcttatggttcatgcaattttgacgaggctgattattcatgcgggtacacgcaa
gaagttgacgataactttgattggttaaagcaaaacaatgttgatggcggatatttcatg
gaggtagaaaccgagaatcacatcaggaatcaaaaagctgttttcacgagtccacagatt
gtacaacaggacacacactgcttctcattcaaataccatctggaagggtcaggagtcgta
accgatggtaacggatcctccccacttggcactctaccgacagctagtggtcggttatcg
gtttacgtcagaaacgacaacaccgacactttgttacagccagtatggacaacacccgag
ttagggggcaccgatggctgggcgacggttcatctggctcttaacccattggcttacagg
gtatcgtttgaagccactgtgctacaagatattcccggagttatagcggtcgataatatt
gttgtgtcttcaaaaccgtgtgattccaccccccatttcctaaggcttggtaacaaggac
gtgaacaagggacaaaatgtttcgttgaaatgcttgttatggggccatagtggacctgac
caagttattttgatgcaaaagtcgagcggggaaacaatcactagatccacgaggaaggtg
ttggacgaccatctatctgttactttcaattttacgaacgtggatctccacgaaagtggg
aaatatcggtgcatttcacaagaagctacgaaagttggagtttcaaattatgcccagctg
agtgtgagaaaacccccccgacccactagagggccgatggtgtcggaacccggttcgacg
agttttatgatccaactaaatatcgatgaattcaccggagatggacctatcgtgcaaact
atattgaagtataggccagtggatgggttgtgggcagatgtccaccatataaccaacgaa
gattaccaactgtggcacctacagcccgacaccgagtatgaggtgtccgtgacactcgtg
cgccctggggtcgggggtgccgggccccctggtcccaccctgcgcagaaagaccaaatgt
ggggttccattacaagcgttacaaaacgttatcccaacaccagtggggtcgaatgagata
caagtcacttggaatgtccccgactttagcatagttcaatgtcatttctatcaatttgtc
gtcaaatatcggatctatgatgaaaacgagccacaagagggggctaatgagtatctacaa
ctggaagttcagcaaaccccgtccgcgtcaatcctcgatttacgaacattcactcgatat
gccatcaaagtatctctagtgacctccggtggctcgattgacactggagattatatcatg
agaacaggggaaggagccccgagcgaggtccccccacaatcctttgttacaactttcatc
aacgagacttctattgccctcaagtgggcggaacctacgccacctaatggagagattatc
ggatacgaggtatcctaccgtggaacccgatcttttgacccaacgtttcaagcgcagaac
gataatgggttaatccaggaaggtggggataaacggggactcgtgctaacggggttacac
ccggggacacggtttgctatttctattagagcccacacgaaggcgggagtgagcaacggg
accgagattatcgcttcgaccgatatttcagcccccacgatgccccggtacccgaacccg
ttcgattcttcgaacaaaacaatcaccccaactacaatagaaatcacattaaagcccgct
gatgctaacggagctcccatcaccaactattacatcataattgaggacgtaactccaaaa
ccgaagacaccctcgaaacctgcagccccatcaagtgttagaaacaagaagaattcggga
aaaggaaacaaacgaaaaaggaaaaatcgtaatcgtaacactcgtagtctcgatgctctc
tggcgccacaagcgacaagcagtggttgccgttagcgacgaacccaatgcttgtttatct
caaccaatcacgttcgaggaagctcagcgcaccaaccgatcgtcttatgccggggctcgg
ttcgccccgagtgaagttacccaggacatgaagtttatggtgggtggaagcagcgacacg
aacgggttcacgaatccccctctcgaccccaacaaggattacaagatatacgttcgtgct
gaaagtaacgtgggaggggaagtgaaagccaactgcgtgctcgtggctttgaaagaccac
aagattgtgacgccaaccacgcggccgacccaaccaacaatggaaaacacaaaaactgtt
caacaagacaatggatcgacagcaatagcgacacccggtgacagggatgcgtcgcaacaa
gaacaagtgatgctgtacgcagcagtagggggcgctgttgtggccgtacttgtgatttct
attgtcgtcattctgctcgctatcaagtttaaaagacgtcgtaaaagattgcacaaagac
gaagtggtcaacccgtttgaggttcgtatgatgatatctgacgtatccacccccggccac
acccttttaccgaccaatcacggtgaaggaagcgtcgaacggagagcgttgatgccggat
gttgttggttacgaacatcaagcgtacaatggattatattacatcgaaaaagcttcggaa
aatggcgcgtcttaccccccagctccatccagtgacgaaagatttgccgttcgtgtggat
gatttccatgtccacgtgtcgcagatgaaagccaccggtggctacggcttcagggaggaa
ttctcgacctttgttgacggcccagccgcgccgtggaccgtggcagagaagccacagaac
aggataaagaatcgctacgggaacataatggcttacgatcatagtcgtgttgtattggaa
cctttacctggtcacgaggaagaatacgggagcgattatattaatgcttcgtatgttaat
ggttacaagaaacctgggatgtacatcgccacgcaagccccaacgtccgatacgagcgca
gacttctggttgatggtttggcaggaacgtagcaatataatagtgatggtcaccaacctc
gtggaactcggcaagcggaaatgtcatcaatactggcccgatgaaactggcgtgtacggg
tcaatacaagtgtccatgaataatgtggaagaaacttccgattacgtcgttcgctcgttc
gttgtgcaacagacggacgggtacgacgtacgtgaagggaaacaattccattttacctcg
tggcctgaccatggtgtcccatctcgccccaccaaccttctatcgtttgttaggagggtg
aagtcatacgacccgcaaggcgaaggccccacactggttcactgcagtgctggttcagga
cgtacaggttgtttcatggtgattgatatgatgctggacatggctcgggatgaagatatt
gtggatatccataatacagtgaaagaagttcggacacgaagggttaatatggtgcagacc
gaggagcaatacatcttcatccatgaagctgttcttgaagcgttgttgtgcggggagacc
tccgtgcccgccggcgacctcgtgcaacattacgatgagcttatcaccgttgatccacag
acgcattttgctccgatacaagaggaatttgagacacttaacgtgatcacccctaaacta
tctgaggacgaatgttccgtggcgcgactccccaggaaccgcggtgccaatcgtttcatg
gacgtgctgcctgccgatcgtcacctggcgtacctcgtaacacctgaccccgccgatcga
gagaataattacatcaatgctgtttatgttgatagttactcctcgaagaatgaattcctg
gtgacacagatgccactcccaaacacagtcatcgatatttggagattaatttacgatcat
aattgttcttctattgtgatgatgaatgatgtcacagaacatgatcagacatgccgacaa
tactggccagaccagggttcggcgatctatggaagcttcacggttgaactgctcacaaaa
gatgacgaggtcgacgtcgttacgaggttgtttaaactgcagaatatagcgaggcctggc
gatggttaccgtctcgtccaacaattccaacttacgaactggccggccccacaacccgtt
ccttactctcgtaactcagtattacgaatcatccaactcatcagcaagtggcagtctgag
tgttcggtcaaccatgaacctgggagagcgctcgtgcactgcgtagctggtgcaggacgc
agtggaagcttcatagcttgttacaacatgtgtgagcaactgagaaacgagtattcagtt
gatgtttttaatattgtgcaaagattgaggaatgttcggccgcaactcgtagaaacatta
gagcaataccgattttgctacgaagttggaatcgagtttgccgaccaatga
DBGET
integrated database retrieval system
