Ciona intestinalis (yellow sea squirt): 100178829
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Entry
100178829 CDS
T01056
Name
(RefSeq) ADP-ribosylation factor 2
KO
K07937
ADP-ribosylation factor 1/2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100178829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100178829
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100178829
04031 GTP-binding proteins [BR:
cin04031
]
100178829
Membrane trafficking [BR:
cin04131
]
Endocytosis
Lipid raft mediated endocytosis
GRAF1-dependent endocytosis
100178829
Arf GTPases and associated proteins
Arf GTPases
100178829
Endosome - Golgi transport
100178829
Exosome [BR:
cin04147
]
Exosomal proteins
Proteins found in most exosomes
100178829
GTP-binding proteins [BR:
cin04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Arf [OT]
100178829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
Gtr1_RagA
MMR_HSR1
GTP_EFTU
RXYLT1_N
FLAD1_M
6PF2K
GRASP55_65
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
100178829
NCBI-ProteinID:
XP_018667741
LinkDB
All DBs
Position
6:1931218..1936186
Genome browser
AA seq
321 aa
AA seq
DB search
YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIVEAKEELTRMLNEDELR
DAVVLVYANKQDLPNAMSTSDVTEKMGLHSLRNRCWYMQATCATTGDGLYEGLDWLSNQL
KQARNLSFPYFSILNSANMGNATQKLFSSLLGKQEMRIMMVGLDAAGKTTILYKLKLGEI
ITTIPTIGFNVKTVEYKNISFTVWDVGGQDKNRPLWRHYIQNIQGLIFVVDSNDRERIAE
AKEELYRLISEDELREASVLVYANKQDLPNAMTVAAVTDKIGLHSLRNREWYIQATCATT
GDGLYEGLDWLVCNQIKKARN
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
tacaagaacattagttttactgtgtgggacgttggtggccaagacaaaatccgacctttg
tggagacattacttccaaaacacccaaggccttatatttgttgtggatagcaatgatagg
gagcgaatagtcgaagccaaagaagaacttacccggatgttaaatgaagatgagttaaga
gatgctgtggtgttggtctatgcaaataaacaggaccttccaaacgctatgagtacgtca
gatgtgacagaaaaaatggggcttcactcgttgcggaatagatgttggtatatgcaggca
acttgtgctactactggcgatggcttgtatgaagggttagattggctctctaatcaatta
aaacaagctcgtaacttgtcttttccatatttttctatattaaatagtgctaacatgggt
aacgcaacccaaaagctgtttagcagtcttcttggcaagcaagaaatgcgaatcatgatg
gtgggacttgacgctgctggaaaaacgacaattctgtacaaattaaagctcggagaaatt
atcaccaccattcctactattggttttaatgttaagacagtggaatacaagaacatcagt
tttactgtgtgggacgttggtggccaagacaaaaaccgaccattgtggagacattacatt
caaaacattcaaggccttatatttgttgtggatagcaatgacagggaacgtatagcagaa
gcaaaggaagagctttatcgattaataagtgaagatgagttaagagaagcttcggttttg
gtctatgcaaataaacaggacctcccaaatgctatgactgtggcagctgtgacagataaa
attgggctgcattcgttgcgcaatagagaatggtatatccaggcaacttgtgctactact
ggagatggcttgtatgaagggttagactggctcgtctgtaatcaaataaaaaaggctcgt
aactga
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