Ciona intestinalis (yellow sea squirt): 100178936
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Entry
100178936 CDS
T01056
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100178936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100178936
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100178936
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
RanGAP1_C
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
100178936
NCBI-ProteinID:
XP_026690179
LinkDB
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Position
4:complement(563640..567298)
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AA seq
573 aa
AA seq
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MAADEEHNVGEVTALFEQTSVRKENIISFKGQGKKLDTAADAAEIIQAIEESKDVQVLEL
VGNTVGVDAAKAVANALRNKPELQRCLWADMFTGRLRSEIPISLRSLGDAIITSKARLVE
LDLSDNAFGPDCAKACVELLKSPSAFTLQILKFNNNGLGGGGIILAQTLIECYEKSSAEG
KPLKLKVFVAGRNRLENPGAKALAKAFKTIGTLEEIQLPQNGIQHAGITALADAVKHSPS
LRHLNLNDNTFTDKGAISMAEAMKHIDSLEIVNFGDCLVRTNGAKAIGKSLEDSNPNLKE
LLLSFGEIQLEGGIAICNGLENKEFLQKLDLNGNKFGEEGVDEVKDRANDFCCKNALTSL
DDDEGIDSDSDEEDSCGEDDNDGRSPEDEQIDSQLLNGQVDLNPKCFLEQVTAPSLVCLS
TKERSNLLEEVAELVTNAEATADACLKLSGLLNEKCLDHITTCSDADAQELRSAVFQAVD
ILLRDAFQKYPNTPMLVINPFLVRMGLLKSEDKKFHAPFDIRPMVVTLGHACQQAYFPTF
TRRLVRSVVAKESKVWNNKSIQLRPQLLQILYL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggatgaagaacataatgttggggaagtgacagcactttttgaacaaacaagc
gttcgcaaagagaatattatttcattcaaaggacaaggaaaaaaattagacaccgcagct
gatgctgctgaaattatacaagccattgaagagagcaaggatgtgcaagttctagaatta
gttggaaatacagttggtgttgatgctgctaaagctgttgccaatgcactaaggaataaa
ccagagcttcaaagatgcttgtgggcagatatgttcacaggaagattaagatcagaaatt
ccaatttctctgcggtcacttggagatgcaatcattacatctaaagcaagattggtggaa
cttgatcttagtgacaatgcatttggcccagattgtgctaaggcatgtgttgaactgttg
aagagtccttctgcttttactttacaaatattaaaattcaacaacaatggattgggtggt
ggtggaataatattggcgcaaacattaattgaatgttatgagaaaagttctgctgaagga
aaaccacttaaattaaaagtatttgttgccgggagaaacaggttggaaaacccaggagcc
aaggcacttgcaaaggcatttaaaactataggaactttggaagaaattcaactacctcaa
aatgggatccagcatgctggtattacagctcttgcagatgcagtcaagcacagtccaagt
ttacgtcatttaaaccttaatgataacaccttcaccgacaaaggagccatatcgatggcc
gaagcaatgaaacatattgacagtttggaaattgtgaactttggtgactgtttggtacga
accaacggcgcaaaagcaatcggtaaaagtctagaagattcgaatccaaacttgaaagaa
ttgttgctttcgtttggtgaaatccaactggaagggggtatagcaatatgtaatggtctg
gagaacaaagaatttttacagaagttagatttgaatgggaataaatttggagaggaagga
gttgatgaggtgaaggatcgagccaatgatttctgttgtaagaatgctcttacatcatta
gatgatgatgaaggaattgattcggattctgatgaagaagactcttgtggtgaggatgac
aacgatggaagatcccctgaagatgaacagatagattcccaacttttaaatggccaggtc
gacctaaatccaaagtgttttcttgaacaagtaacagcaccaagtctggtttgtttgtcg
acaaaagaaagatcgaatcttctggaggaggttgctgaattggtcacgaatgcagaagca
acagctgatgcttgtttaaaactttcgggtttgttgaatgaaaagtgtcttgatcacata
accacctgcagtgacgcagatgcccaggaattaagatcagctgtttttcaagctgtcgac
attttactgcgcgacgcgtttcagaaatatcctaacactccaatgctcgtcattaacccg
ttcctcgtccgcatggggctgctcaagagcgaggataagaagttccacgcaccgtttgac
attcgcccaatggttgtgacactgggccacgcatgtcaacaagcatattttccaacgttt
actcgtcgtttagtgcgtagtgtggttgcaaaagaaagcaaggtttggaacaataagtca
atccaacttcgtcctcagttactgcagatcctttatttgtag
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