Ciona intestinalis (yellow sea squirt): 100178941
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Entry
100178941 CDS
T01056
Name
(RefSeq) lon protease homolog, mitochondrial isoform X2
KO
K08675
ATP-dependent Lon protease [EC:
3.4.21.53
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cin01002
]
100178941
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cin03029
]
100178941
Enzymes [BR:
cin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.53 endopeptidase La
100178941
Peptidases and inhibitors [BR:
cin01002
]
Serine peptidases
Family S16: lon protease family
100178941
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
100178941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lon_C
LON_substr_bdg
AAA
Lon_lid
AAA_5
AAA_2
AAA_22
ChlI
RuvB_N
AAA_16
AAA_PrkA
Viral_helicase1
NACHT
nSTAND3
NPHP3_N
RNA_helicase
AAA_14
bpMoxR
TsaE
NB-ARC
AAA_18
Torsin
RsgA_GTPase
NTPase_1
AAA_11
AAA_7
ABC_tran
IstB_IS21
AAA_33
AAA_19
AAA_28
AAA_17
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
100178941
NCBI-ProteinID:
XP_002131849
Ensembl:
ENSCING00000009166
LinkDB
All DBs
Position
4:5371488..5385337
Genome browser
AA seq
990 aa
AA seq
DB search
MRTMALRCHLGSNKQFQILRSNMNFARTVTHSKQCLNGLLQNHTRTLHIYSNLQQSTING
KHDIGHLHKTHLSQTRLKHKVLGNSFTNSLLFNPSKSNWNFNLTRSFANFSSSSSGNNED
DGKEDDDDKPVTNENNEQEVEQEENKRPEVIYSGLGNSNSVALSALTVPDNFPNVPIIAV
NRNPVFPKFIKMIEIKDPKLMEVLRRKISLSLPYAGVFVKKDDNNEVDVVDDLERDLYSV
GTFVQIHEMHDMGDKVRMIVMGHRRIKLCEAMSIEEDILIDQKPEDEGSKKEDKNEVKPN
EENQVTKGILMGKVENIPNPEIPTSEDIKALTAEVVKTIRDIISLNPLYRESVAQIIQAG
QRVMDNPVYLSDMGAALSSGTTDELQDVLEEMNVRERLYKSLSLLKKELELSKLQQRLGR
EVEDKVKATHRKYMLQEQLKIIKKELGLEKDDKDAIEEKFRSRLKELTVPQHIQEVIDEE
LNKLGFLDNHSSEFNVTRNYLDWLTSIPWGKSSEDNVDIKKAKEILENDHFGMDDVKNRI
LEFIAVSILRSHTHGKILCFHGPPGVGKTSIARSIARALNREYFRFSVGGMHDVAEIKGH
RRTYVGAMPGKMIQCLKKTKTENPLVLIDEVDKIGRGYQGDPSSALLELLDPEQNHNFLD
HYLDVTVDLSKVLFICTANVLDTIPDPLKDRMEMIQVSGYVAEEKTAIARKYLIPQTHEQ
CGLNEDKAFVEDEALDLLIKNYCRESGVRGLLQQIEKIHRKAAFKLVNEQSEDRVVVNQS
NLEDFVGKPPFTSNRMYDVTPPGVVMGLAWTAMGGSTLYIECCERSRRDVKEGGDVTVEL
TGRLGDVMKESARIASTFARSFLARKKPENHFFDGANLHLHVPEGATPKDGPSAGCTMVT
SLLSLALNQPIRQDIAMTGELSLTGKVLPVGGIKEKTLAAKRAGVSCLIFPRENAKDFND
LAEYIKAGVETHFVEHYSEVFEIAFGQPIS
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgagaactatggctctccgttgtcacttaggttcaaataaacaattccaaatactgcga
agtaatatgaattttgcaagaactgtcacgcacagtaaacaatgtcttaatggcttgtta
cagaaccatacaaggacacttcatatttattccaacttgcaacaatcaactataaatgga
aaacatgatattggccacttacacaaaacgcatttatcacaaactagactcaaacataaa
gtgcttggtaattcatttaccaattccttgctttttaatccttcaaagtcaaattggaat
tttaatctgacaagaagttttgcgaatttttcctcctcttcaagtgggaataatgaagat
gatggcaaagaagacgatgatgataagcctgttaccaatgagaataatgaacaagaagtt
gagcaagaggaaaataaacgtccagaagtaatttactcagggttggggaactctaactca
gtagctttgagtgcgttaaccgttcctgacaattttccaaatgttccaattattgctgtg
aacaggaaccctgtgtttccgaagtttattaaaatgattgagataaaagatccgaaatta
atggaagttctaagaagaaagatttctctctctcttccatatgctggtgtctttgtgaaa
aaagatgacaataatgaagtggatgttgtggatgatctggagcgtgatctttactccgtg
ggaaccttcgtgcagatccatgagatgcacgatatgggcgacaaagttagaatgatagta
atgggacataggaggatcaagttatgtgaggccatgagcatagaagaagacatccttatt
gatcagaagccggaggatgaaggatcaaagaaagaagacaaaaatgaagtgaagccaaat
gaggagaatcaagtcacgaagggaatattgatgggaaaagtggaaaatattccaaacccc
gagattcccacttcagaggatatcaaggcactaactgctgaagttgtgaagacaatccgg
gacattatttctctcaatcctttatacagagaatcagtggctcaaataatacaggctgga
cagcgagtaatggacaaccccgtgtacttaagtgacatgggagcagcactgagcagcggc
acaacagatgaactacaagatgtattagaggaaatgaatgtaagagagaggttatacaaa
tcgctttcgttgcttaagaaggaactcgaactaagtaagttgcagcaaagacttggccga
gaggttgaggataaagtgaaagccacacacaggaaatatatgttgcaggaacaactaaaa
atcatcaagaaagaactcggtttggaaaaagatgacaaagacgcgatcgaagagaaattt
cgatctcgattaaaagaactgactgtaccacaacatatacaagaagtcattgatgaagaa
ttgaataaacttggtttccttgacaaccattcatctgagtttaatgtaacacgaaactac
ttggattggttaacttccataccatggggaaaatcaagtgaggataacgtggatataaag
aaagcaaaagagatcctcgaaaacgatcactttggaatggatgacgttaagaaccgtatc
cttgagttcatagctgtcagcatcctccgatcccatactcatgggaagatcctttgcttc
catggtcctccaggtgttgggaagacaagcatagcgagatcaatcgctcgtgctcttaat
cgagagtacttcaggtttagtgttggaggaatgcatgatgttgcggagattaagggacat
aggaggacatatgtgggtgcaatgcctggaaagatgatacagtgtttaaagaagacaaag
acggagaatccacttgtgttaatagatgaggtagacaagataggcagaggataccaaggt
gatccttcatctgctttgttggaacttctcgaccccgaacaaaatcataactttctggat
cattacctggatgttactgtggacttatcaaaggttctcttcatatgcacagccaacgta
ctagatacaataccagatccacttaaagatagaatggaaatgattcaagtgtcaggttac
gtcgccgaggaaaaaacggcgattgcccggaaatacctgatcccacaaacccatgagcaa
tgcggtctcaacgaggacaaagcgtttgtagaggacgaagcgttggaccttcttattaag
aattattgtcgtgaaagtggagtacgtggcttgctacaacaaatagaaaagatccaccgt
aaagctgcattcaaacttgtaaacgaacaatccgaagatcgtgttgttgttaaccaatca
aatctagaggatttcgtggggaaacccccgtttacgtcaaaccgcatgtatgacgtcacg
ccaccaggtgtcgtcatggggttggcttggacggctatgggcggctcgactctttacatc
gagtgttgtgaacgtagcaggcgtgacgtcaaagaaggtggtgacgttactgtggaactt
actggaagacttggtgacgtcatgaaagaatctgcgaggatcgcgtcaacttttgcgcga
agttttcttgcaagaaagaagccggaaaaccattttttcgatggagctaacctgcatttg
catgtgccagagggcgccactcccaaggacggcccaagtgctggttgtacaatggtcacg
tccctactttccttagcccttaatcaacccataagacaagatattgcgatgactggcgaa
ctgtcgctcacaggcaaggtacttcctgttggtggaattaaggagaaaacgctggcggcg
aagcgggcgggggttagctgtctcatattcccgcgggagaacgcaaaggacttcaacgac
ctcgctgagtacatcaaagctggcgttgaaacccacttcgtggagcattactctgaggtt
tttgagattgctttcggacaacccatcagctaa
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