Ciona intestinalis (yellow sea squirt): 100178953
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Entry
100178953 CDS
T01056
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor 2-like
KO
K03234
elongation factor 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cin03012
]
100178953
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100178953
Translation factors [BR:
cin03012
]
Eukaryotic type
Elongation factors
100178953
Exosome [BR:
cin04147
]
Exosomal proteins
Proteins found in most exosomes
100178953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_IV
EFG_C
EFG_III
GTP_EFTU_D2
EFL1
MMR_HSR1
EF-G_D2
DUF4347
Elongin_A
PAD_M
Motif
Other DBs
NCBI-GeneID:
100178953
NCBI-ProteinID:
XP_009858635
Ensembl:
ENSCING00000009356
LinkDB
All DBs
Position
5:complement(2335311..2341364)
Genome browser
AA seq
849 aa
AA seq
DB search
MVNFTIDQIREIMDKKTNIRNMSVIAHVDPGKSTLTDSLVSKAGIMAGSKAGEARFTDTR
KDEQDRCITIKSTAISMYYELSDKDMQWVEGKKEGNGFLINLIDSPGHVDFSSEVTAALR
VTDGALVVVDCVSGVCVQTETVLRQAISERIRPIVFMNKMDRALLELQLEKEDLYQTFQR
IVESVNVIVATYAVEDGPMGNIMIDPQKGTVGFGSGLHGWAFSLKQFAEMYSEKFKVPLP
KLMNRLWGDNYFNPSTKKWAKSKSPESDRGFNTFVLTPIYKVFDAIMNNKTEEIGKLMEK
CNVKLKGDDKDKVEKQLLKAFMRTWLPAGDTLLQMITIHLPSPVVAQKYRSELLYEGPAD
DEVATAIINCDXKGPLMMYVSKMVPTSDKGRFFAFGRVFAGTVATIMVARMSLEQVTPWL
DAFPLTNSLIYICICFMFRTILMMGRYTEAIEDVPCGNICGLVGVDNFLVKTGTLTTSDQ
AHNMKQMKFSVSPVVRVAVEAKNPSDLPKLVEGLKRLAKSDPMVLCHIEESGEHIVAGAG
ELHLEICLKDLEEDHAQIPIKKSDPVVSYRETVNEASDRMCLSKSPNKHNRLFMTAQPLP
EGLSEKIDEGKDIFPRQDAKLRGRYLADNFDFDVNEARKIWCFGPEGTGANLLIDCTKAV
QYLNEIKDSVVAGFQWASKEGVLCEENMRGIRFNIHDVTLHADAIHRGGGQIIPTARRVL
YACQLTAGPRLLEPMYLVQIQCPEQAIGGIYGVLNRRRGQVNQTAHNPGTPILTVNAYLP
VNESFGFTADLRSNTGGQAFPQCVFDHWQVFNGDPLDEGSKPFAVVSATRKRKGLNETVP
LLEKFYDKL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggtgaattttaccatcgatcagatccgtgagatcatggacaagaagaccaacatccgg
aacatgtccgtgattgcccatgtcgaccccggaaaatctacgttgactgattcgttggtc
agcaaagcaggaatcatggctggttcaaaagctggtgaagctcgattcactgataccagg
aaagatgaacaggatcgctgcatcaccattaagtcaactgctatttcaatgtactacgag
ttgagtgataaggacatgcaatgggttgaaggaaagaaagaggggaatggattcttgatt
aatttaatcgactctcccgggcacgtagatttctcatctgaagtgacagcagctctccgt
gtaactgatggagctcttgttgttgtggattgcgtcagtggtgtatgtgtgcaaaccgag
accgtgttacgacaagccatctctgagagaatccggcctattgtcttcatgaacaagatg
gaccgtgcactgcttgagttgcaactggagaaggaagatctgtaccagaccttccagaga
atcgtggaaagtgtgaacgtaattgtggccacttacgcagttgaagatggtcctatgggt
aacattatgattgaccctcagaagggaactgttggttttggatccggtctccatggctgg
gccttttcactcaagcagtttgcagaaatgtactctgaaaaattcaaagttccattgcca
aagttaatgaacaggctatggggggataactactttaacccttcaaccaagaaatgggca
aaatcaaagtctcctgaaagcgaccgtggctttaacacctttgtgttgactcctatctat
aaggtgtttgacgcaattatgaacaacaaaactgaggagattgggaagctcatggagaag
tgtaatgtcaaactgaagggagatgacaaagacaaggtggagaagcaacttctcaaagct
tttatgaggacctggttgccagctggagacactctgcttcagatgatcaccattcattta
ccatcaccagttgtggctcagaaatacagatctgagttgttgtatgaaggtccagctgat
gatgaagtagccactgccatcatcaactgtgatnctaaaggccccttgatgatgtacgta
agcaagatggtaccgacatcagacaaaggtcgattctttgccttcggacgtgtgtttgct
ggaaccgttgcgaccataatggtagctaggatgagccttgaacaagtaactccttggtta
gatgcattcccgctaaccaattcactgatatacatatgtatctgctttatgtttagaacc
attctgatgatgggtcgttatactgaagctattgaagacgtaccatgcggtaacatctgt
ggtttggtcggcgttgacaactttttggtgaaaactggaactttgacaactagtgaccag
gctcacaacatgaagcagatgaaattcagtgtttctcccgtggtgagagttgcagtggaa
gccaagaatccatctgatcttccaaagcttgtggaaggattgaaacggttggccaagtcc
gatcctatggtcctgtgtcatatagaggagagtggtgagcatattgtagcaggtgctggt
gaattgcatcttgagatttgcctcaaggatttggaagaagaccatgcccagatccctatc
aagaaatctgatccagttgtatcttaccgagagactgtgaacgaggcttccgatagaatg
tgtttgtccaagtcaccaaacaaacacaacagattgttcatgactgctcagccattacct
gaaggtttatctgaaaagattgatgaaggcaaggatattttcccaagacaagatgcaaag
ctccgaggtcgttacttggccgacaactttgatttcgacgtcaatgaagctcgtaagatc
tggtgtttcggacccgaaggtacgggagccaaccttttgatagattgcaccaaagctgtg
cagtatcttaatgaaatcaaggactctgtagttgctggattccagtgggcatcaaaagag
ggtgtcctttgtgaagagaacatgagaggtatccgtttcaacatccatgacgttaccttg
cacgctgatgccatccacagaggtggtggtcaaatcatcccaactgctcgtcgtgtgttg
tacgcctgtcagcttactgcaggacctcgtcttcttgaaccaatgtacttggtccagatc
caatgccctgaacaagccattggaggcatctatggtgtattgaacagacgtcgtggtcag
gtaaaccagaccgcacataaccctggaactccaatcttgacagtgaatgcatatctgcct
gtcaatgagtcctttggcttcaccgctgatttgcgatcaaatactggtggtcaggctttc
ccacagtgtgtatttgaccattggcaagtgttcaatggcgaccctctggatgaaggctca
aagccttttgcggtggttagtgccacacgtaagcgcaagggtcttaacgagaccgtacca
cttctggaaaaattctatgacaagctctag
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