Ciona intestinalis (yellow sea squirt): 100178994
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Entry
100178994 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100178994 isoform X1
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100178994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cin03400
]
100178994
Enzymes [BR:
cin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
100178994
DNA repair and recombination proteins [BR:
cin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100178994
Prokaryotic type
100178994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-GeneID:
100178994
NCBI-ProteinID:
XP_009858030
Ensembl:
ENSCING00000012687
LinkDB
All DBs
Position
3:3624831..3626208
Genome browser
AA seq
256 aa
AA seq
DB search
MRMPIGKQAYALRNLRKRKETDKSAAYASKYFKSYDAQDSKPERINETFYDDDCIQTAKS
MLGMTLARKLESEILRCKIVEVEAYMSNADKASHSYNFKRTKRNEAMFMKPGTLYVYMTY
GMYYCMNISSKGHGDAVLIRGVEPFKGLETMQKNRAKINSKQNQIKNVTNGPSKLCQALK
ITKQLDKIDMSNSDEIWLEKGTSVDENDIVTCKRIGLKETTSGDWATKPLRFYIYGNMFV
SIKDKLEEKIKEDNFT
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgcccattggcaagcaagcgtacgcactgcggaatttgcgaaaacgaaaggaa
actgataaatctgccgcttatgcaagcaaatatttcaagtcctatgatgcacaagacagc
aaacctgaacgaatcaatgaaactttttatgacgatgactgcattcaaactgctaagtca
atgctaggaatgactcttgctagaaaacttgaaagtgaaattctcaggtgtaagattgtt
gaagtagaagcttacatgtcaaatgctgataaagcgtcgcattcctacaactttaaacgc
acaaaaagaaatgaagcaatgttcatgaagccaggcactttatatgtctatatgacatat
ggaatgtactactgcatgaatatatcaagcaaaggtcatggagatgcagttttaatacga
ggagtagaacccttcaaaggtttagaaacgatgcagaaaaatcgcgccaaaataaacagc
aagcaaaaccagataaaaaatgtaacaaatgggccgtcaaagttatgccaggcactcaaa
attactaaacagttggacaagattgacatgtcgaacagtgatgaaatatggctggaaaaa
ggaacttcagtggatgaaaatgacatcgttacctgtaaaagaataggcttgaaagaaact
acctctggtgactgggcaacaaaaccactcagattttatatatacggaaatatgtttgtt
agtataaaagataaactagaagagaaaataaaggaagataattttacttaa
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