Ciona intestinalis (yellow sea squirt): 100179012
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Entry
100179012 CDS
T01056
Name
(RefSeq) elongation factor Ts, mitochondrial isoform X1
KO
K02357
elongation factor Ts
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cin03012
]
100179012
03029 Mitochondrial biogenesis [BR:
cin03029
]
100179012
Translation factors [BR:
cin03012
]
Eukaryotic type
Elongation factors
100179012
Prokaryotic type
100179012
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
100179012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
EF-Ts_N
UBA
DUF1499
Motif
Other DBs
NCBI-GeneID:
100179012
NCBI-ProteinID:
XP_002129433
Ensembl:
ENSCING00000001275
UniProt:
F6ZVT2
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All DBs
Position
9:3515462..3520676
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AA seq
328 aa
AA seq
DB search
MLRFSVLLRRSNLSGCRLWFSTGEPNKEVNTKQVLMELRRKTGYPLITCRQALQASGYNV
EKAKEHLLQLAKEKGWNTMQMDGGVLKEGLISVVTNKNNGLIVEVNCQTDFVAKTKEFQS
LVKDAAQTLLDVYSTQQPSKIDLNPPELLKLVVSGKKQTIEDTVAITIGKLKEKIEIRRA
SLLSVPTNSILAVYIHPSVLISKTRPGSTLGSYGAMVSLSPTDENTGKSSIKMAGRDIAQ
HIVGMNPSCIGTCLKPTPNKSVTDSTPDDDVINPPEMLSPDESSHELLKQPFLLDSSISV
AHWLNYHQLNVNDFIRFQVGEKTKSAEK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgattttctgttctactgcggaggtcaaatttatctggctgtcgtttatggttc
agtaccggagaaccaaacaaagaagtgaatacaaaacaagttttaatggagttacggcgt
aaaacaggctatccgttaataacttgtcgccaagctctgcaggcgtcaggttataacgtg
gaaaaggcaaaagaacatttgttacaactcgcaaaagagaaaggttggaacacgatgcag
atggacgggggggtgctgaaagaaggattaatatcagttgtaacgaataaaaataatgga
ttaattgttgaggtgaactgccaaacagattttgttgcaaaaaccaaagaatttcaaagt
ttagtaaaagatgcagctcaaacattacttgatgtttattcaacccaacaaccttccaag
attgatttgaatccacctgaacttctgaagttggtggtttctggaaagaaacaaactatt
gaagatactgtggctattactattggcaaactaaaggagaaaattgaaattcgccgagct
tcgttgctatccgtcccaaccaattccattctcgctgtttacattcatccgagcgtcctc
atctcaaaaactcggccaggatctactttaggaagttatggggccatggtgtcactttca
ccaactgatgagaatactggaaagtcctccatcaaaatggctggcagagatattgcgcaa
catatagttggaatgaacccatcatgtattggaacatgcttaaaaccaaccccaaataaa
agcgtgacggactccacaccagatgatgacgttattaaccctccagaaatgcttagtcca
gatgaatcaagtcatgaactacttaaacaaccatttcttttagacagttctatctcagtg
gctcattggttgaattatcaccaactaaacgtgaacgattttattcgttttcaagtcgga
gagaaaacgaaatctgccgagaaataa
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