Ciona intestinalis (yellow sea squirt): 100179028
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Entry
100179028 CDS
T01056
Name
(RefSeq) LOW QUALITY PROTEIN: GRIP and coiled-coil domain-containing protein 2
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100179028
Membrane trafficking [BR:
cin04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100179028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRIP
Rab_bind
CCDC39
ADIP
Seryl_tRNA_N
DMPK_coil
FKBP15
HH_AprE
Motif
Other DBs
NCBI-GeneID:
100179028
NCBI-ProteinID:
XP_009857425
LinkDB
All DBs
Position
1:complement(6005647..6017303)
Genome browser
AA seq
1921 aa
AA seq
DB search
MDSPRTGGESTPPQSNTPRKLDTMSHEDLVKGYKRQMLLLQKLKAKCDEFQTKLKAKADY
DDIKGELTSSKQKYDELLTQNESLKSTEALLKKGNNAMNEELECLRMKQDTLLSSMQYLQ
EDHAAVSASNKELAEQSEKSQIALKDVQAEKIELADQIQDQLHQISDLKSHIKNLSSEHA
KLEELTGENKTLKKELAAMKMTVNMFKTQKKPDQTEKIEELNLKVEELNEEVKLLETQSV
KLNEDREAERSNHKQMCVDLETELHASVKHQSEVESELESSKTEVTDLKEKLIQLQEIHT
AKITAMNETISDEIEQSKTLTETLENIKSTKADLEEKLLKLETENSDLNSTITTLQAEQE
NRKESDTEKADLLKELSEANKQLTIQTDAISRLTSENEEIKSSAKDLLEQKDLASLDLEK
ERERVKCLTESENKLFQKMTQKESEIQILEEKFKDLQTKAHEFEQRSKDVENISSQNNQL
GEKLAEAKSKIDSQAQEMNSLSEDKKQLSAEVMDLKEQLSNSTCESETVLKKYTEENVTL
QNAISQLESDKEEINANKESLQADLEDVKQELSVLRTENESFKASIESNNGAVHQLAEQV
EKNDSMMAQITDLNTEVEAASKEIEVLKEKLKNQDELVNEKEVLAEKCSQYSNNCRELQE
KVEVLEKELKEYVDQVLTKVADTNQAAEEKVRELELENSELHKQVEDLKPEMEQLKMVAE
ESLLLKKKLEDSDAVILQHKEDNLSIKEKMSQLQGKLQKSDSQCGAMGEEISSLKEENEK
LVAGKSSASNSVAELQKELNEYKSQMGEQATAHSAEIQELNCQIETLTRGASLTQDEKTE
MDQLKRVAEESLLLKKKLEDSDAVILQQKEDNLSIKEEMSQLQGKLQESESWCGAMGEEI
SSLKEENEKLVAGKSSASNSVAELQKELNEYKSQMEEQATAHSAEIQELNCQIETLTRGA
SLTQDEKTEMDQLKRVAEESLHENLQKSGDEFQAGMTDLKQQLSLVEKKKSELENKVGEL
KSNLETEELKQNKFQEQILALEEKLKTTTDAKDEALSEIKRLTSSHQESKEMATALQQEK
EKLNNHLLDVKNEIQMLERXLFSTKDKLSETEEIVKSLKVSAQESSADLTEAESKCKDLE
LKVETLTLECERLTQSQSELDVSVGDGEGGGNQKEIENLQQSVHEKEILNNKLKILAVKA
KKERDAAKMQLQVAQEETAALKVQISGMEAKLMGSQTQASNVQMMQLECDKLQDEVDQIN
KEKSSIQKSLDETLNQLTASQVEKAKLSEQLDSTNSDVLALQNSKAEVEQLLNETKTLVT
LIEKEKENVSKEKVAVKQELEATKIQISTLSKSVDDYARKLKESQTALKDAEMNVKQHGL
MSLEMEQYEKTVEGLQSNITELSSKNQELKSEIIGLEEKITSLQEERKEGEKLRIEAEDR
VTKTKETLDVTRDELSNSKALEKELNIQVSEGTSQICLLTEETEQQKLDLASQSSENRVL
QEQIVALKTSTTRNIETLERRLHSAQMEVESLKSEKETLKHDYESYKVRVHSVLKQQKSK
DTQPPAKQDTTEINNLKLTMEQIKMKLHESQNILASREGELDLLQGDYDRLLRQQQESSD
SAVEREGRWKSRVKSLQQELASVRKQYADALQNISDREDSVSAASQLEMQRMKEDHEKVV
SLIKEDVAHLERELQKARSDAKRKAEDKIETSTPRKIPTSPLPYHYHRPPLESHPSMMSS
VDYRSVAREDGEGEENPDRSSVVSFEQILKTPNQIKSVTVLSDTVSLSSEVQLKQLESRF
EAQSKQLEHLSEVASENEATTARLIDQNQVLKDEIRRLEKNQERQASVSNLEYLKNVIYK
FATLPPCDEKQHLLPVLDTMLKLTAEEKLTLQTIALGDNTVTESQEASGWGSYLQRWSGM
Q
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atggattctcctcgaactggtggggagtcaaccccacctcagtccaacactcccaggaag
ttggataccatgtcgcatgaagatttagtcaaagggtacaaacgtcaaatgcttctactt
caaaaactcaaagcaaaatgtgatgaatttcaaaccaaactaaaagcaaaagctgactat
gatgatattaaaggagagcttaccagttctaaacagaagtatgacgaattattgacacag
aatgaatctttaaaatccaccgaagctttgctcaaaaaaggaaacaatgctatgaatgag
gaacttgaatgtttaagaatgaagcaagacactttgctttcttctatgcagtatttgcag
gaggaccatgcagctgtctcagcatcaaacaaagaactggctgagcagagtgaaaagagt
caaattgctctcaaagatgttcaagcagagaagatagagcttgcagatcaaatccaggat
cagcttcatcagatttctgacctgaaatcacacattaaaaatctttcgtccgaacatgca
aagttggaagagctgacaggagaaaataaaacacttaagaaggaactggccgctatgaaa
atgacggtaaatatgtttaaaactcaaaagaaacctgatcaaacagaaaaaattgaagaa
ttaaacctaaaagtcgaagaattgaacgaagaagttaagctgttggaaactcaaagtgta
aagttgaatgaggacagagaggccgagcgttcaaaccacaaacagatgtgtgtggacctt
gaaacagaattacatgcaagtgtgaaacatcaatctgaggttgaatcagaattggaatca
tcaaaaacggaggttactgatttgaaagagaagctaattcagttacaggaaattcatact
gctaaaataactgctatgaatgaaactatttcggatgaaatagagcaaagtaaaacgtta
actgaaactttggagaatataaagtctactaaggctgatttagaggaaaaactgttgaaa
ttagaaactgagaattctgatttaaattctacaattactacattacaagctgagcaggaa
aatcgaaaagaatctgatactgaaaaggcagatttgttgaaagagttgtctgaagcaaat
aagcagctcacaattcaaacagatgcaatttcaaggctgacatcggaaaatgaagaaata
aagagtagtgcgaaagatttgttagaacaaaaagaccttgcttcattagatctggagaaa
gagagagaaagggtaaaatgtttgacagaatctgaaaataagctctttcaaaaaatgaca
caaaaagagtcagagatccagattctggaggaaaaatttaaagatttgcaaaccaaggct
cacgagtttgagcagaggtcaaaagatgtcgaaaacatttcgagtcaaaataatcaactt
ggtgaaaagttggctgaagccaaaagtaaaattgattcgcaagcacaagagatgaattca
ttatctgaagataaaaagcaactttctgcagaggtaatggatctgaaagagcaactgtct
aacagtacatgtgaatccgaaactgtcttgaaaaaatatacagaagaaaatgttacattg
caaaatgctatttcacaacttgaaagtgataaagaagaaataaacgctaataaagaatca
ttacaagcagatcttgaggatgtaaaacaagaactatcagtgctacgaacagaaaatgaa
tcctttaaagcatcaattgaaagcaacaatggtgctgtgcatcaactcgctgagcaggtt
gagaaaaatgattcaatgatggcacaaattactgacttaaacactgaggtggaagctgct
agcaaggagattgaggttttaaaggaaaaattaaaaaatcaagatgaacttgttaatgaa
aaagaagttctggctgagaaatgttcacagtacagtaacaactgcagggaactacaagag
aaggttgaagtgcttgaaaaagaactgaaagaatatgttgaccaggtgttgacaaaggtt
gcagatactaaccaagctgctgaagaaaaagttcgggaattagaactggagaattcggaa
ttgcacaaacaggttgaagatctaaaacctgagatggaacaattaaaaatggtggcagaa
gaaagtttgttgctcaagaaaaagttagaggattctgatgctgttattttgcagcacaag
gaggataatctaagtataaaagaaaagatgtctcaactccaaggaaagttgcagaaaagc
gactctcagtgtggtgcaatgggtgaagaaatttcttcactaaaagaggaaaatgaaaaa
ttggtagctggtaagagttccgcttcgaatagtgttgctgagttacaaaaagaattaaat
gaatataagagtcaaatgggagaacaagcaactgctcactctgcggagatacaggagttg
aattgtcaaattgagacactaacaagaggagcatcccttacacaggacgaaaaaactgag
atggatcaactaaaaagggtggcagaagaaagtttgttgctcaagaaaaagttagaggat
tctgatgctgttattttgcagcaaaaggaggataatctgagtataaaagaggagatgtct
caactccaaggaaagttgcaggaaagcgaatcttggtgtggtgcaatgggtgaagaaatt
tcttcacttaaagaggaaaatgaaaaattggtagctggtaagagttccgcttcgaatagt
gttgctgagttacaaaaagaattaaatgaatataagagtcaaatggaagaacaagcaact
gctcactctgcggagatacaggagttgaattgtcaaattgagacactaacaagaggagca
tcccttacacaggacgaaaaaactgagatggatcaactaaaaagggtggcagaagaaagt
ttgcatgagaatctacagaagtctggagatgagtttcaagctgggatgacggacttgaaa
caacagctttctctagttgagaaaaagaaatctgaattagaaaacaaggttggtgagctt
aaatcaaatcttgagacagaagaactgaaacaaaataagtttcaagaacaaattttggct
ttagaagaaaaattaaaaactacaacggatgcaaaagatgaagcattatctgaaattaaa
aggctgacaagttctcaccaggagtcaaaagagatggctacagcattacagcaggaaaaa
gaaaaattaaacaatcatttgttagatgtgaaaaatgaaattcaaatgctggaaagatga
ttgttttccacaaaagacaaattaagcgaaactgaagaaattgtgaaaagtttaaaggta
tcggcacaagaatcttctgcagatttgactgaagctgaatctaaatgcaaagaccttgaa
ctgaaggttgaaacacttactttggaatgtgagagactaactcaatctcaaagtgagctt
gatgtttcagtgggcgatggtgaggggggtgggaaccaaaaagaaattgaaaatcttcag
caaagtgttcatgagaaagagattcttaacaataaactgaaaatattggctgtcaaagcc
aagaaagagcgagatgctgcaaagatgcagctgcaagttgcacaggaagaaacagcagcg
ttgaaggttcaaatctctggcatggaagcaaaactcatgggaagtcaaacacaagcaagc
aatgtacagatgatgcaacttgaatgtgataaactacaagatgaagttgatcaaataaat
aaagagaaatcctcaatacaaaagtcattggatgaaactttgaatcaactaactgcttcc
caagtagagaaagcaaagttatcagaacagcttgattcgaccaactctgatgtactcgca
ttgcaaaatagcaaggctgaagttgaacaattacttaatgaaacaaaaaccttagtaact
ttaattgagaaagaaaaggaaaacgtttccaaagaaaaagtagcggtgaagcaggagctc
gaagcaacgaaaatacagatatccacactaagtaaatcagttgatgattatgcaaggaaa
cttaaagaaagtcaaactgcattaaaagatgctgaaatgaatgtgaaacaacatggtctc
atgtctcttgagatggaacaatacgagaaaactgttgaaggtcttcaatccaacatcacc
gagttgtcctccaagaatcaggagttaaaatctgaaattatcggcctggaggagaagatc
acttctttacaggaggagagaaaagaaggggaaaagttacgcattgaagctgaagacagg
gtaacgaaaactaaagaaacattagatgtcactagagatgagttaagtaactcgaaagcg
cttgagaaagaactcaacattcaagtcagtgaaggaacatctcaaatctgtcttctcact
gaagaaactgagcaacaaaagcttgacttggcttcccaatcatctgaaaatcgtgtctta
caagaacagattgttgctttaaaaacatcaaccacaagaaacattgaaacgttagaaaga
agacttcacagcgcccagatggaagtggaatcattgaaaagtgagaaagaaactttaaaa
cacgattatgaaagttataaagtgagagtacattccgtgttaaagcagcagaagagcaaa
gatacacaaccgcctgctaaacaagacactacagagatcaacaacttgaagttgacaatg
gagcaaataaagatgaagctacatgagtctcaaaacatcctcgcatccagggagggagag
cttgatctcttgcaaggagattacgatcgtcttcttcgtcaacaacaggagtcgtccgac
agtgcagtggagcgcgaagggcgctggaagtcacgggttaagtctcttcagcaagagctc
gcaagtgtccggaaacaatatgctgacgccttgcaaaatatttcggatcgggaggattct
gtgagtgcagcgagtcagttggagatgcagaggatgaaggaagatcatgagaaggtcgtg
tcattgataaaagaggatgttgcgcatctggagcgcgagttgcaaaaagctcgatcagat
gcaaaacgaaaggcagaagataaaattgaaacttcaaccccaagaaaaattcccaccagt
cccctgccttaccactaccaccgaccgccgctagagagccacccatcgatgatgtcatca
gttgattatcgatcagtggcaagagaggatggagaaggagaggagaatccggatcgttct
tcggttgtctcctttgaacaaattttgaagacaccaaatcaaattaaatcagtcactgtc
ctatccgacactgtcagtttgtcgtccgaggttcaacttaaacagctagagtctcgtttt
gaagctcaatccaaacagctggaacatctgtcagaggttgctagcgagaacgaagcaacg
acagctcgcctaattgaccagaaccaagtgctgaaagatgaaatacgaaggctggagaaa
aaccaagaacggcaagcctctgtgtcaaatttggaataccttaaaaatgtgatttataaa
tttgcaacactgccaccttgtgacgagaagcagcaccttctaccagtgttggacaccatg
ctcaaacttactgccgaggaaaaattaactcttcaaaccattgctcttggtgataatacg
gtcactgaatcacaggaagcgtcgggttggggaagctatctccaacgttggtcaggcatg
cagtga
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