Ciona intestinalis (yellow sea squirt): 100179054 Help Entry 100179054         CDS       T01056                                  Name (RefSeq) ubiquitin-protein ligase E3B   KO K10588   ubiquitin-protein ligase E3 B [EC:2.3.2.26] Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100179054  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:cin04121]     100179054 Enzymes [BR:cin01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.26  HECT-type E3 ubiquitin transferase      100179054 Ubiquitin system [BR:cin04121]  Ubiquitin ligases (E3)   HECT type E3    100179054 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HECT Motif Other DBs NCBI-GeneID:  100179054 NCBI-ProteinID:  XP_009861889 Ensembl:  ENSCING00000011800 LinkDB All DBs Position Unknown AA seq 895 aa AA seqDB search MHGVLKQLCGKFLLDLNERGCLCVLSSVVNVSCKMALHEVMTSTAFNVAIRIMESCCFSE KEVVTFAFNFLSIPALVWNLKLKHPKCLSQVLDHGLLGRCILLFHVEGACEKHGLIPSHY SPDGVISVLCIFSNLVQLFVIEPNTLVQLRIQCVSLLNQLMKYLYENTTKQKSNLTTWHP VLGYFSNHDARNSHSMQEMKKQLELMWDPVLVRTFFYDVLTLPSLHAETSVPTQAEQITK ARNKIKLTDKLSSYLKSIASSRPKHTLLPTGGRKLEYAEVKNTCCTCLLYKKSLLVFTKQ LHLEMLTGLTFMEEVLCRLWRFICELGPTGGLQLFLSALSYHPDQAEPYFAVFTLFCDMT SHILSILDDVEFYEQQVLFHLEELVTISSFLCQFVFKVIWGNLLKDSSSSVYPVYESAHT LLMVLYDRDARRSFTPPGHWLYKEVKSSVIRAEVEKSQMRGKLIMDKIPFILPHKDRVLL FRSLVAADKLKLGITEDNGSMVHIRVHRSRLVEDGFEKLGAMQGNKLKGIIRVKFINDLG LDEAGIDQDGVFKEFLEEIIQKVFNPDMNLFKVTAGGDMKLYPSPLSYLQDHHLHLFTFV GKMLGKAIYEGIVLDIPFANFFLRSILSKQQTALYSPIDELPALDPEFYKNLTWIKRYEG DISELDLRFMHEEDIMGKIQSHELIPGGAGIPVTNENRIMYIHTLAHYRLHTQILHQTKA FVAGFRSVIPTNWISMFSSPELQRLISGDNVDMDLTDLKKHVVYYGGFHSSHRVVRWLWD ILEQDYSPSQRSAFLKFVTSCSRPPLLGFANLQPQFSIRCVEVPDDEDTGDTVATVLRGF LRLPSRSRRSSSHNHRLPTASTCFNLLKLPNYPSKVVLKDKLKQAIANNTGFELS NT seq 2688 nt NT seq  +upstreamnt  +downstreamnt atgcatggagtgttgaagcaattgtgcggaaagtttctcctggatttaaatgagcgaggt tgtttatgtgtgctaagctcagtggttaacgtaagctgtaagatggctctacatgaggtt atgacatctactgcattcaatgttgcaataaggataatggaaagttgctgcttctctgag aaagaagttgtaacattcgctttcaatttcttatcaatacctgcattagtttggaatctg aagctaaaacatccaaaatgtctgtcacaagtacttgatcatggtttgcttggacgatgc atcctcctcttccatgtggagggtgcatgcgaaaaacatggattaattccatcgcattac tcgcctgacggggtgatttctgttctttgcattttctccaaccttgttcagttgtttgtg attgagccaaacacactggttcaattgagaatacaatgtgtgtcactgctgaaccagctc atgaaatatttatacgaaaacacaaccaagcagaaatcaaacttaacaacctggcatcca gtgcttggttactttagcaaccatgacgcacggaacagccattctatgcaagaaatgaag aaacaacttgagttaatgtgggatcccgtgctggttcgaactttcttctatgatgttctt acattaccatcactgcatgcggaaacatctgttccaacacaagctgaacaaatcactaaa gcaagaaacaaaatcaaattgacagataaattaagttcgtatctcaaatcgatcgcgtca tctcggcccaaacacactttgctgcccactggtggtaggaaacttgagtacgctgaagtg aaaaacacgtgttgtacttgccttctttataagaagtcactattagtgttcacaaagcaa cttcacctagaaatgttaaccggacttacttttatggaggaagttttatgtcgattatgg aggttcatatgtgagcttggtcctacaggtggattgcaacttttcctctcagctttgtcg tatcatcctgatcaagctgaaccttattttgccgtgttcactttattttgtgacatgacg tcacatatcttgtcaattctggatgatgttgagttttacgaacaacaagttcttttccat ctcgaggaactcgtcacaatttcatcttttttgtgtcagtttgttttcaaagtaatctgg ggtaatctattgaaagattcatcaagctcagtttaccctgtatatgaatcagcccatact ttacttatggtgttgtatgatagagatgcaagaagatcattcactccaccaggccactgg ttgtacaaggaagtcaaatccagtgtgattcgagcagaagttgagaaatcccagatgaga gggaaacttatcatggacaagattcctttcattcttcctcataaagacagggttttactt tttcgatcattggtggccgccgacaaacttaaactaggaataacggaagacaacggttcc atggttcatatcagagttcacagaagtcgacttgttgaagatggttttgaaaaacttggt gcaatgcaagggaataagttaaaaggcatcattcgtgtgaagttcatcaatgaccttgga ttagacgaagccggcattgatcaggacggtgtctttaaagaatttcttgaggaaattatt cagaaagtttttaatcctgatatgaacttgttcaaggtcacagcaggcggagacatgaag ttatatccatcacccctctcatatttacaagatcatcatctgcatttgtttacctttgtt ggcaaaatgttgggcaaagcaatatatgaaggaattgttctcgatattccgtttgcaaac tttttcctcaggagtatattgagcaaacaacagacagcgttatacagtccaatagatgaa ctgccggcccttgaccctgaattttacaaaaacctgacatggatcaaacgttatgaaggc gatataagtgaacttgacctgaggttcatgcatgaggaagatataatggggaaaatacaa tctcatgaactaatacctgggggagctggtattcctgttaccaatgaaaacagaataatg tacatccacactttggcccattatcgcctccacacccaaatcttgcatcaaacaaaagct ttcgttgctggtttccgatcggttattccaacaaattggatttctatgttttcctcacca gagttacagcgactgatatcgggagacaacgttgatatggatttaacagatttaaagaaa catgtggtatattacggaggattccattcatcacatcgtgttgtacgttggttatgggat atacttgaacaagattattcaccgtctcaaagatccgctttccttaagtttgtcacttcg tgttcacgacctccacttcttggcttcgcaaacttgcagccccagttctctatcagatgc gtggaggttcctgatgatgaagacacaggtgatactgtggcaactgtgcttagaggattc ctccgtcttccctcgcgatctagaagatcttcaagccataaccaccgactcccaacagca tctacgtgcttcaatctgcttaaattaccaaactacccaagcaaagttgttttgaaagac aaattaaaacaagcgattgcaaataataccggcttcgaactatcttag

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