Ciona intestinalis (yellow sea squirt): 100179057
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Entry
100179057 CDS
T01056
Name
(RefSeq) ATP-dependent RNA helicase DDX3Y isoform X1
Organism
cin
Ciona intestinalis (yellow sea squirt)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HP0268
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
100179057
NCBI-ProteinID:
XP_002131481
Ensembl:
ENSCING00000007637
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All DBs
Position
4:2367393..2377388
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AA seq
733 aa
AA seq
DB search
MTHATNGLEQQMSQMDISAGRGGGQARFNSAGGYVPPHMRNQAMGRGGPPQVLHGPPPSY
GGAPMTGPNGEVRYGHLMPGPPPGSMPPGSYGAPPQRGGYQNGVMRDRNGPPNRYNDRGP
YRPPHQQYMGYGGGYNDRGRGGYNDRGYNDRRGFWDGQQQQQPQVADRWARLDDGMNSGR
YGQPREGDDRLAKKWDERQGGGDAFTDTVDWSKPLPRDENLERNLFSGSNTGINFDKYED
IPVEATGDDVPEHIENFKQAELGEIVDDNLESCKYTVPTPVQKYAIPIIQSKRDLMACAQ
TGSGKTAAFLLPTLSQLYTKGPGESLKATTSHQRGRRKLFPLALVLSPTRELASQIYDEA
RKFAYRSHVRPCVVYGGADVGAQMRDLDRGCHILVATPGRLVDFIERGKVGLCYIRFVIL
DEADRMLDMGFEPQIRRIVEQSDMTHKGERQTLMFSATFPKEIQILARDFLNNYIFLAVG
RVGSTSTNITQKVVWVDEEEKHKFLLDLVNATDSKSLTLIFTETKKGADALDEFLYTRKY
KSTSIHGDRTQREREEALLAFRTGEYPILVATAVAARGLDIPNVRHVINFDLPSDVDEYV
HRIGRTGRVGNIGLATSFFNNKNVNIVKDLVDLLIEASQEVPPWLENMALTYQKGKPRSS
GKRFSAGFGSRDYRQQQNRGGSRGGGNAGRGSQIQNRGTQGGGWGMPAFYRGNDYGGSFG
NTGGSGPDWFGGN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatgcaactaatggattggaacagcagatgtcgcaaatggacatcagtgctgga
agaggtggtggacaagcccgtttcaactcagcaggcggttatgtacctccacacatgagg
aatcaagccatgggaagaggaggaccccctcaagtcttgcatggacctccaccatcttac
ggaggagctcctatgactggcccaaatggagaagttcgatatggtcacttgatgcctgga
cctccaccaggttcgatgccccctggtagttatggagccccccctcaacgcggtggttat
caaaacggtgttatgcgtgatcgcaacgggcctcccaaccgctacaatgacagaggacca
tacaggccaccacaccaacagtacatgggttatggtggaggttacaacgaccgaggacgt
ggtggttacaatgaccgtggatacaatgacagaagaggtttctgggatggacaacaacag
caacaaccacaagttgccgatagatgggcaaggttggacgatggcatgaatagtggaagg
tatggccagccacgtgaaggcgacgacaggctcgcaaagaaatgggatgaaagacaaggt
ggaggcgatgctttcacggatactgtagattggagcaaaccacttccacgtgatgagaat
ttagagaggaacttgttctctggttcaaacactggcatcaacttcgacaaatacgaagat
attcctgtagaagcaacaggagatgacgtccctgaacatattgaaaatttcaaacaagct
gaacttggagaaattgtggacgacaatctggaatcatgcaagtacacagtacccacacct
gtgcagaaatatgccattcctatcattcaaagcaaacgtgacttgatggcatgtgctcaa
actggttctggcaaaacagcagcatttttgctcccaacgctttctcagttgtacacaaag
ggaccaggtgaatcactgaaagcaacaacttcacatcaacgtggacgacgaaagcttttc
ccacttgctcttgttctctcaccaaccagagaacttgcatcacagatttatgacgaggca
cgaaagttcgcttatcgctcccatgttcgaccatgcgtggtgtatggtggtgcggatgtt
ggagcacagatgagggatcttgatcgtggatgtcacatccttgtcgctactcctggaaga
cttgtggatttcatcgaaagaggaaaagttggtctctgctatatcaggtttgtgattttg
gatgaagcagacaggatgttggacatggggttcgaaccacagatcagaagaattgttgag
cagagtgacatgacacataaaggcgagcgtcaaacactgatgttcagcgccacattcccg
aaggagattcagatcctcgctcgtgatttccttaacaactacatcttcctcgctgttgga
agagttggatccacctccaccaacatcacacagaaggtcgtctgggtagatgaagaggaa
aagcataaatttcttcttgatctcgtcaatgccacagattcaaaatcactgactttgatt
ttcaccgaaacaaagaaaggagccgatgctttggatgaatttctttacacaaggaagtac
aaatccaccagtatccacggtgaccgaacacagcgtgaaagagaagaagctttgttggct
ttcaggacaggagaatatcccattcttgtggcaactgctgttgcagctcgtggtttggac
atcccaaacgtgcgtcatgtgatcaactttgatcttccaagtgatgtggatgaatatgtt
catcggatcggaagaactggtcgtgtcggcaacatcggtcttgccacttcctttttcaac
aacaagaacgtgaacattgttaaagatctagttgatcttttaatcgaggcttcacaagaa
gtcccaccatggctggaaaacatggccctcacataccagaagggaaaaccacgcagctct
ggcaagcgattctccgctggctttggctctcgggattaccgacaacagcaaaaccgtgga
ggcagcagaggaggaggcaatgctggaagaggatcccagatccagaaccgtggtacccaa
ggtggtggttggggaatgccagcattctaccgtggtaacgattacggtggttcgttcggc
aacactggtggatccggtccagactggtttggtggcaactaa
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