Ciona intestinalis (yellow sea squirt): 100179121
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Entry
100179121 CDS
T01056
Name
(RefSeq) platelet glycoprotein 4-like isoform X1
KO
K06259
CD36 antigen
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04145
Phagosome
cin04148
Efferocytosis
cin04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100179121
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100179121
04148 Efferocytosis
100179121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100179121
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100179121
04090 CD molecules [BR:
cin04090
]
100179121
Membrane trafficking [BR:
cin04131
]
Endocytosis
Phagocytosis
Scavenger receptors
100179121
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of breast milk
100179121
CD molecules [BR:
cin04090
]
Proteins
100179121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-GeneID:
100179121
NCBI-ProteinID:
XP_009858812
LinkDB
All DBs
Position
6:complement(159059..169090)
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AA seq
558 aa
AA seq
DB search
MGCCNKKCGLIATVIVGGILVILGGIINVVFEDLFNQILLQESVIAVGTLMYDNWIEVAT
PTYLSYYLYNMTNGDEFLAPRKPYVKPNLQEIGPYVFREYLSKDTVHFLDDDVPQQVYYR
QKTMIVFDRERSAGDLSDLVTTVNPIGASMPAIVDFVFSQRNQTTPNAIYSALNTIYRTT
GTELIFTRSVNDILFGFQDNFFDLIANLVNETTGVEIPDFGLFSTYNDSRGWFDYQVYTG
KDATDLTNIITAYKNQTELNYWGSKECNMLNGTDGTTTPPFMTQENPVYFFVDDICRSIY
ATFVEEVVLERVPGWKYAVPPEVFQCPDKNPNNLCFCPDTTSPLCHHDGAILINRCQFGA
PIMISSPHFLYGDGFYLNMTTGIEPPNVLEHEAALVYEPFTGAAIKADKRLQINILLKPT
PKINVFSKINEELVFPVVWINESATVGKSDADLLYGLLVLPAEVVYILQIILCILGSLLF
LGPLFYFVVLHYSNVDEKDTRKPNGAVPEMKSYNVYENENVFDDVKEYKIGEPEHTNTRV
TSTTSTTELIENQKGMKF
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgggttgctgtaacaaaaaatgtggtttgattgccacagtgattgtgggtggtatattg
gttatacttggtgggattattaacgttgtgtttgaagatcttttcaaccaaatactctta
caggaaagcgttatcgcagttggtacgcttatgtatgataactggatcgaagtagcaact
ccaacatatttatcttactacctgtataacatgacaaacggcgacgaatttctagctcca
agaaaaccatacgtgaaaccaaatctacaagaaatcgggccttatgtttttagggagtac
ctttccaaagacacagtgcattttcttgatgatgacgtcccacaacaagtatattatcga
caaaagacaatgattgtgttcgaccgtgaaagatccgcaggagatctaagtgacttggtt
accactgttaaccctattggcgctagcatgcccgcaatcgtggactttgtattttctcaa
cgaaaccaaacaacaccaaatgcaatctattccgctttgaacactatataccgtactact
ggaaccgaattaatattcacacgatccgtaaacgacatcttattcggttttcaagataat
ttttttgacttgatcgcgaatcttgtgaatgaaacaacgggtgttgaaattccagatttt
ggacttttttcaacgtacaacgattcccgcggctggttcgactaccaagtatacactgga
aaagatgcgactgatttaaccaacataataactgcctataagaatcaaacggaactaaat
tactgggggtcaaaagaatgcaacatgcttaacggaactgatggaacgactaccccgcca
ttcatgacacaagaaaacccagtttatttctttgtagatgatatttgcaggtcaatttat
gccacgtttgttgaagaagttgtacttgaacgtgtaccaggttggaagtacgctgtacca
ccagaagtgtttcagtgccctgataaaaatccaaacaacctttgtttttgcccggataca
accagcccgttatgtcatcatgatggagctattttgatcaacagatgccaatttggtgct
cccattatgataagttcaccacacttcttgtacggtgatggtttctacctaaacatgacg
acgggtatcgaaccaccaaacgtattagaacatgaagctgcacttgtgtatgaacctttt
acaggggcagcaattaaggcggacaaacgattacaaatcaatatccttttaaagccaact
cctaaaataaatgtttttagtaaaatcaacgaagaattagtttttccagtcgtttggata
aacgaaagtgcaaccgttggtaaatctgatgcagatctactgtatgggttacttgtcctg
ccagcagaagttgtttacattctacaaattattctatgtattcttggttcgcttttattt
cttggacctttgttctattttgtcgttctccattacagtaatgttgacgaaaaggacacc
cgtaaaccaaacggtgcagtgcctgaaatgaaatcttataacgtttatgagaatgaaaat
gtatttgatgacgttaaagaatataaaattggcgaacctgaacatactaacacacgtgta
acatcgacaacgtcgaccacggagttaattgaaaaccaaaaaggaatgaagttttaa
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