Ciona intestinalis (yellow sea squirt): 100179125
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Entry
100179125 CDS
T01056
Name
(RefSeq) methionine--tRNA ligase, mitochondrial-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00450
Selenocompound metabolism
cin00970
Aminoacyl-tRNA biosynthesis
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
100179125
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100179125
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cin01007
]
100179125
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100179125
Enzymes [BR:
cin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
100179125
Amino acid related enzymes [BR:
cin01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100179125
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
100179125
Prokaryotic type
Other AARSs
100179125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Motif
Other DBs
NCBI-GeneID:
100179125
NCBI-ProteinID:
XP_002126600
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All DBs
Position
2:2704288..2706427
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AA seq
567 aa
AA seq
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MRLPDLVLCHLKRQFLRSASHKLFFKRCKTYYATTPIYYVNSVPHIGHLYTTTLADTACR
WKQLVTDTECRLATGTDEYGSKVMKAAAINDMETIEYCNKISSRFKEMCDEFGLSYHDFI
RTTEERHKETVQHFWEVVQSNGYIYKGIYEGWYCTSDETFLTQSQVEEVHNKSTGKSEYV
SIESGHAVEWTKETNYMFQLSFFTDIIREKILSDPDFVYPSKARNAVLKLLDEQIGDLSI
SRERSRVPWGIPVPRDSSQTIYVWMDALVNYLTVSGYPRSSYTEMWPADVHFIGVDILKF
HAIFWPAFLMAAGIELPKQIVASSHWTIDYSKMSKSKGNVVDPFDIAGKVTAEGFKYFLL
RQGVLEHDCNYTESLVYEVINADLVNVLGNCLNRAGAKKLNPQNHYPPFHKEIFSKDELG
NYIEKRITDLDMNYIQQVKNLPAVADSHCSKFHFYNAIHEIISIAREANMMVHRHQAWKL
DEHPDDLKLLESIVHSVFEGLRVAGILLQPMIPTLATKLLDKLNIPLNERTWVKANESFL
ELNGQHEHLIGRKLGNDTTVLLKRLKK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttcctgatttggttttgtgtcatcttaagcggcaatttcttagatcagcttcg
cataagttgttctttaaacgctgcaaaacttactatgcaaccacacctatttattatgtt
aactctgtgccacacattggccacctgtataccaccacccttgctgatactgcttgtcga
tggaaacaacttgtaactgacactgagtgtcggttagctacaggaacagatgaatatggc
tcaaaagtgatgaaggctgcagccataaatgatatggaaacgatagaatattgtaacaaa
atatcatcaaggttcaaagaaatgtgtgacgagtttgggttaagttatcatgactttatc
cgtaccactgaagaacgacacaaagaaactgttcaacacttttgggaagttgttcaaagt
aatggatacatatacaaaggtatttatgaaggctggtattgcacttccgatgaaactttt
cttactcagtcccaagtggaagaagttcacaataaatccacagggaaaagcgaatatgtt
tccattgaatccgggcatgcagtagagtggactaaagaaacaaactatatgtttcaactt
tccttttttactgatattatccgagaaaaaatactaagtgatccagattttgtttatcca
tccaaagcaaggaatgctgttttaaagttacttgatgaacaaattggagatctctctatt
tccagagagagaagtagggttccatgggggattcctgttcctagggactcaagccagacc
atttatgtatggatggatgcattggtcaattaccttacagtttctgggtatccaagatca
agttacacagaaatgtggccagcagatgtccattttataggggtggatattttgaagttt
catgcaattttttggccagcgtttttaatggctgctggtattgaactgcctaaacaaatt
gttgctagttcccactggactatagactattccaaaatgtcaaaaagcaaaggaaatgtg
gtggatccatttgatattgcgggaaaagtaacagcagaggggtttaagtattttcttctt
aggcaaggagtgttggaacatgattgtaattacactgagagtttggtttatgaagttata
aatgcggatcttgtcaatgttttggggaactgcttaaatcgagcaggggctaaaaaacta
aatcctcagaatcactaccctccatttcataaagaaatattctccaaagatgaattaggc
aactacattgaaaagcggataacagacttggacatgaattacatacagcaagtgaaaaac
cttcctgcggttgcagactcccattgctcaaaatttcacttctacaatgcaattcatgaa
atcatctccatagcaagggaagcaaacatgatggttcaccgacaccaagcgtggaagtta
gacgaacatcccgatgatctgaaactgttggaaagcattgtgcattcagtgtttgaaggt
ttaagggtggctggtattcttcttcagccaatgattccaactttggccacaaaactgttg
gacaagttaaatattcctctaaatgaaagaacatgggttaaagctaatgaaagttttctt
gagttaaatggccaacatgaacatttaataggaagaaagctgggcaacgatactacagtt
ctcctcaagcgtttaaagaaatag
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