Ciona intestinalis (yellow sea squirt): 100179132
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Entry
100179132 CDS
T01056
Name
(RefSeq) tetratricopeptide repeat protein 39B isoform X2
KO
K24943
tetratricopeptide repeat protein 39
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
100179132
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
100179132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Iml2-TPR_39
TPR_12
Motif
Other DBs
NCBI-GeneID:
100179132
NCBI-ProteinID:
XP_009861400
Ensembl:
ENSCING00000006222
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MDSNTKPQEDSDDEFEDASSQISSGESIDLNVALAEVNVAINLFFNNRFDEAKKLMQERC
ETSMYHALGLSTLLFLEASLTFEQAAIAKAILSIKKAVQLNNRYRKKQNLTSSFTKILGF
GDNNDFTDVELHAEVVFAELNLFRAALTFIQDENLISFIRGALKVRLCYQTYNNCQKLID
SKTLNCKNHAQDFIGAVLLGCGAFNIGLSLLPPKILSLLEWIGFTSDKKKGLQQLKDGFN
NVNLRSSLISLFILGYNLFVTVHVGTHDADLEYVGIILPKMLEKFPNGVFFYLYAGRLEQ
LKGNFEKAIGRLEKAATLQNDWKQFSHACYWELMWCHATLFKWQEAADYADKLRKESNWS
KCTYTYLQAVFLYMVDGNGLKHKEEIVALLKEMPSLKQRFAGKSIPMEKFLIRKARKYFE
QQEYLLLPAHEMIYAWNGLVMLKQNKEIRDKHLQLIIQQQNVLEEKKEKFSSNSDNNSKN
DKGDAFNYYDDYCLLNLMKGACLRFDRQPMQAELCLSDIKENYKGINKDHYLAPAALADL
AWMCIEEGKFNEATAHLKYIRKTYSHYSMESRIHFRIHAAQTKLNEISKPSFST
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaacactaagcctcaggaagactcagacgacgagtttgaagatgcatctagt
caaatatcctcaggagaatccattgatttgaacgtggctcttgctgaagtgaacgttgca
attaatcttttctttaataacagatttgacgaagccaagaaattaatgcaagagagatgc
gagacaagcatgtatcatgcattaggattgtcaacactcttattcttagaagcatctctg
acctttgaacaggctgccatagccaaagcaatactcagcataaagaaagcagtgcagctc
aataatagatatcgtaaaaagcaaaacctaacgtcatccttcactaaaatccttggcttt
ggcgacaataatgattttacggatgttgaactccatgccgaggttgtgtttgccgaactt
aatctatttagagctgcccttacatttattcaggatgaaaacctcataagtttcatacga
ggtgcgctaaaagttcgtctatgttaccaaacatacaataactgccagaagttgattgac
agcaagacattaaattgtaaaaatcacgctcaagatttcattggagctgttttactgggc
tgtggtgcatttaacatcggcttgtctctccttccccctaaaatcctttccttacttgaa
tggattggtttcacctcagataagaagaaaggcttacaacaacttaaagacggtttcaac
aacgtcaacttacgaagttcacttatttcacttttcatattgggatacaacctgtttgtt
acagtacatgttggcacccatgatgcagacttagaatatgttgggataattttgccgaaa
atgttggaaaagtttccgaacggtgttttcttctatttgtacgctggaagattggaacaa
ttgaaaggaaactttgaaaaggcgatcggccgtttagaaaaagcagccacactacagaac
gattggaagcaattttctcatgcttgttactgggagttaatgtggtgtcatgctactctg
tttaaatggcaagaagctgctgattatgctgataaactaagaaaagagagcaattggtca
aaatgtacgtacacctatctacaagctgtatttctctacatggtagatggtaatggatta
aaacacaaagaagaaattgtcgccttacttaaggagatgccttcattgaagcaaaggttt
gctggcaagagcattccaatggagaagttcttgatcaggaaagctcgcaaatattttgag
caacaagaatatcttctactgcccgcacatgaaatgatctacgcatggaatggcctcgta
atgttgaaacaaaacaaggaaattcgcgacaaacatcttcaactcattattcaacaacaa
aatgtattagaagaaaaaaaggaaaagttttcatcaaattccgataataatagcaagaat
gacaaaggtgacgccttcaactattatgacgactattgcctcttaaacttaatgaaggga
gcttgtttaaggtttgatcgacaaccaatgcaagctgaactttgtctgtcggatatcaag
gaaaattacaaaggaataaacaaggaccattacttagcccctgcagcgttagctgactta
gcatggatgtgtattgaagaaggaaagtttaatgaagcaactgctcatctgaaatatatc
aggaaaacgtactcacactactcaatggagtctcgtattcacttccgcatacacgctgca
caaaccaaactcaacgagatatcaaaaccaagcttttcaacatga
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