Ciona intestinalis (yellow sea squirt): 100179137
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Entry
100179137 CDS
T01056
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
100179137
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100179137
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
100179137
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GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
100179137
NCBI-ProteinID:
XP_002129833
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Position
8:3497283..3504255
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AA seq
650 aa
AA seq
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MGLQRTCINVRGFTAWLACIFFGEVLAGTYTRSVLTSIERRFELPSTITAFIASSYQIGN
LTVMILVSYLGSRVHRPRFLALGSLLLFTGYMLVVLPQFLGGLYEFTDISTITSNSTESF
TCTATDRTIPTAEACEDDEQTAKSNLYILIIVGIVVCGIGGAPTQPLGLSYVDDHSAEHN
SALYIGIITTIALVGPAFGYVMGSFFLKIWVDVGWVDLESINITPRHQSWVGAWWLGFIV
CAVVVGVAGIPLWFYPSKLDLVEKDTTDANEDESKKLAPSKNQVEEPKDEELNLKGIGPA
LVRLFTNPQYVLTIVIFTTVGFKIAGIGTFIVKYLEVGFGKSAAQGSFLIGAINLPFLIV
GTLLGSIIIKKWHLEKVGIVRLTLFGFTLSFLCLLPTFFIGCDTISHAGLTMPYPSSSQD
IGSAENSCNSMCHCNPTMYTPVCGPDNITYVSPCYAGCTESFSATGKKEYTSCSCLGSNS
TDFKMTVGRCSVSNCEDDIWYVIVSKSLANFFSGLVITGIMILKLRCVSPQDKSFGIGIG
LLVYRLLAAVPSPIIFGSVIDNSCLFWSQKPCSNRHYCTVYDNHRYRRGFVGLILIAQAV
AIVAALFLHRLVMKERGEYTIQHKNEEKKMVTSLSDEETEEDFFGKETVV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgggcttacaaaggacgtgtattaatgtacgagggttcaccgcatggctcgcatgtatt
ttcttcggagaggtgctggcaggtacttacacacggagcgtactaacatcgattgagcga
cgttttgaactccccagcactataactgcctttattgcttcaagctatcaaattggcaac
ttaactgtgatgattcttgtcagttacttgggtagtcgagtgcacagacctcgcttttta
gccctcggcagtcttctgttgttcaccgggtacatgttagtcgtcttgccgcagtttctc
ggcggtttgtacgaattcacagatatatcaaccattacgtctaattcgaccgaaagtttt
acttgcacagcgactgatcgaaccatacctacggctgaggcatgtgaggatgatgaacag
acagcaaaatcgaatctttacatactaatcattgtcggcatcgtggtgtgcggcattggg
ggagcgcccacacaaccactcggcttgtcatacgtagatgatcattctgctgaacacaac
tcagcactttatataggtataatcacaactattgctttggttggaccagcatttgggtac
gtgatgggttcattttttctaaagatctgggtggacgtcggttgggttgatcttgagtcg
atcaatataactccgcggcaccagtcatgggttggggcttggtggcttggttttattgtg
tgcgctgttgtggtcggtgttgctggtatcccactgtggttctacccgagcaagctggat
ttagtggaaaaggatacaactgacgcgaatgaggatgaatcaaagaaattggcaccttcg
aaaaatcaagttgaagaaccaaaagacgaagaacttaacttgaaaggtattggaccagca
ctcgtccggctattcacaaaccctcagtacgttttaacgatcgtcatatttactactgtt
ggttttaagatcgctggcatcggaacctttatagtaaagtatcttgaagtcggatttggc
aagtcagcagcgcaaggaagttttttgataggagctatcaatttaccattcttgatcgtt
gggactctgttgggaagcattatcattaaaaaatggcacttggaaaaagttgggatcgtc
cgtttgaccttgttcggatttaccttatcattcctatgtctgcttccaacgttttttatt
ggttgcgatacgatctcccacgcagggttaacaatgccgtatccttcaagcagtcaggat
ataggttctgcggagaacagctgtaactcaatgtgtcactgcaatcctactatgtacact
ccagtatgcggtccagacaacataacatatgtttctccgtgttatgctggttgcaccgag
tctttttctgcgactgggaaaaaggaatatacatcatgttcatgtctcggatccaatagt
acggattttaaaatgacagttggtcggtgttcagtgagtaactgcgaggacgacatctgg
tatgttattgtaagcaagtcgttggcaaacttcttcagtggtttggtcattaccggtatc
atgatattgaagttaaggtgtgtttcgccacaagacaaatcatttggaataggaattgga
ttactggtatatcgactgttagctgcagttccaagtcccattatatttggatctgtaatt
gacaattcttgcttgttttggagccaaaagccatgtagcaacaggcattactgcaccgtg
tatgacaaccaccgttatcgtagaggcttcgttggcttgattcttatagctcaagcagtg
gcaattgtagctgcgcttttcttacacagacttgtaatgaaagagcgaggagaatatacg
atccagcataaaaacgaagaaaagaaaatggttactagtcttagtgacgaagaaacagaa
gaagactttttcgggaaagaaactgtagtttaa
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