Ciona intestinalis (yellow sea squirt): 100179161
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Entry
100179161 CDS
T01056
Name
(RefSeq) lariat debranching enzyme-like
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100179161
03009 Ribosome biogenesis [BR:
cin03009
]
100179161
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100179161
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
90S particles
RNase
100179161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
100179161
NCBI-ProteinID:
XP_002131892
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All DBs
Position
2:complement(5554610..5560196)
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AA seq
574 aa
AA seq
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MHIAVEGCCHGELNKIYETLQFIEKKEEIKISLVLCCGDFQAVRNEADLNCMSCPDKHKS
MQDFWEYYSGKKVAPYLTIFIGGNHEASNYLQELPFGGWVAPNIYFLGYAGVVSYKGIRI
GGLTGIFKQHDYSKGHHEIPPYNQSTKRSVYHIRNIEVFRLKQLKKDMDIMMSHDWPNGV
VEHGDKEELLRKKTFFRKDVENNQLGSLPAWQLLTAIRPHYWFSGHLHVKFAAIIDHEVN
ESTPTKNNQTKFLALDKCLPHRDFLQVIDIPCQENLSDELYYDAEWLAVLKETNHLTSVS
PSSFILPTPGLHEKSDFSVDEEKIEEVIKQLDGDLKIPRNFKPDSSCFYDPQNHRRHSVV
QHRINNQTTQMCLKLGITDPIIMIMESKRESMNRNSLLNDSSWISGDDGHSTVISNVSIN
PDEIDLGDSDTEEVTDVKLAEESPQDEGATTTDDAGATSLSSMSEEEVETGETKQDAPFK
TPIRLAARFSMNLPSPVNDPLSSTPLRTSNTTSSETEMPFSPVSSSDSDIGNNHVCPKRQ
SDTDSEVSDSQTNPAPPKFKRRNFACYSQSEDDT
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcacattgctgttgaaggctgctgccatggagagctcaataaaatatacgagactctt
caattcattgagaaaaaggaagaaattaaaatcagcctcgtgttatgttgtggtgacttc
caagcagttagaaatgaagcagatttaaattgtatgtcgtgccccgataagcataagtct
atgcaggatttctgggagtattactctggcaagaaggttgcaccttaccttaccatattc
ataggcgggaatcacgaagcatcaaactatttgcaggaattgccatttggtggatgggtt
gctccgaatatttatttccttggttatgctggtgtggtgagctacaaaggaatcagaata
ggtggcctaactgggatttttaagcagcatgattattctaaaggccaccatgaaatccca
ccttataaccaaagcacaaaacggagtgtttatcatataagaaatattgaagttttcagg
ctaaaacagctgaagaaagacatggacatcatgatgtcacatgactggcccaacggtgta
gttgaacatggagacaaggaagaattattgagaaaaaaaacattctttagaaaggatgta
gaaaacaaccagctaggtagtttaccggcatggcaactactgacagcaataagacctcac
tattggttctcaggccaccttcatgtcaagtttgctgcaataattgaccatgaagtgaat
gaatcaactcctactaaaaataaccaaactaagtttcttgcacttgacaagtgtttacct
catcgtgactttcttcaagttatcgacataccttgccaagaaaacctttcagatgaactt
tattatgatgcagagtggctcgcagttctcaaggagacaaatcatctaacatccgtctct
ccatcctccttcattcttcctactcccggtcttcatgagaaatcagatttttcagttgat
gaagaaaaaattgaagaggtgataaaacaactggatggggatttaaaaatccctcgcaac
ttcaaaccagactcctcctgtttttacgatccacaaaatcaccgtcgacacagtgtcgtc
caacacagaattaacaaccaaaccactcaaatgtgtctgaaacttggtattacagatccc
atcattatgattatggagtcaaaacgtgaaagtatgaaccggaattcacttttaaatgat
tcttcatggataagtggggacgatggacatagtaccgtgataagcaacgtgtcaatcaac
cccgatgaaattgaccttggagactcagatactgaagaagttactgatgtgaagttagca
gaagaatccccacaagatgaaggagcaactacgactgatgatgcaggagcaacatctctc
tcctctatgtcggaggaagaagtggaaacaggtgaaacaaagcaagacgctcccttcaaa
actccgatccggttagctgcccgcttctcgatgaacctcccatcccccgtcaacgatcct
ctctcatccactcccctccggacttcaaacacaacatcctcagagacagaaatgccattt
tcccctgtctcttcctctgattcagacattggcaacaaccatgtttgtcccaaacgacag
agcgacacagactcagaagtatctgactctcaaactaatccagctccccctaagtttaaa
cgacgaaattttgcttgttactcgcaaagtgaagatgacacttga
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