Ciona intestinalis (yellow sea squirt): 100179204
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Entry
100179204 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100179204
KO
K27397
PHD finger protein 14
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100179204
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
100179204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
PHD
zf-HC5HC2H
PHD_2
SLX1_C
DUF7874
Motif
Other DBs
NCBI-GeneID:
100179204
NCBI-ProteinID:
XP_009859863
LinkDB
All DBs
Position
10:complement(754299..764217)
Genome browser
AA seq
1307 aa
AA seq
DB search
MSFMYQTMLSRAPGKRKIKLQEENILRLMQEDDPDEEEDMDFEVAHDHAERNGSGSESGT
SDSAEDSNSSSNEESESGNENEPSTSKKLPKRTQYNDNGIPSSFKDHGSVPTIKSTNEMI
NSKYYNVPHPIVDVLKKAEKQLKVSTSYVKRNVDLSQVRTCCICLKHNESAHLLTCHKCF
ITVHKECCRTRKLKSMKKSWFCDVCISAQPQSCELCPSKEGCLKETNTGQWCHVVCARYI
LKSNIFSSNSKSNVIDFSNLNYKLYGSKECYLCEDRLVSKTGICVKCDAGLCKVYFHVTC
AQKHGLLSENETGMNSATDPYFVYCPHHVNKEDVETSQKVSLACFAAVKYACKRKKLNSN
RKIRLNKCTQRYIFSLNERPKLPLKPGPPPTRLLSTNAEALLQLNKKAELIYNIDVRSPA
TYFPSPSKVRRRHRVAPNLTGEFVSHYADRELRISEAKERINEELEKNQLLMTEQSKLRQ
QYEEVHNTLFEERRKQRDLKTSSRHLCSLILSLKEWANLNHNNLSDKKHTNAKRARLSLH
PLVHVVQDTEEETSESPNQPLDVELNGSDSEDYNRNMTSHLLKSCNICKSDNKQHLMVEC
DVCNQWSHLGCLDPPLTQMPRKTKFALWQCSECAPSNDVATSSESDDDQHGSLITEEGRR
LTRRIHRPPEKLSTTLLNDQQLFEQRRMMNYIQRSFKTGSLKKRKLSRDRLRMLKKKYMS
SSNNHKVKTTSSSEHTSSNSIALKSSSLKKEVASLPPVTVTIGQKTLEDTKPIVTSQPVF
VNNKHISPQVQIKPLEKMTLPLPISHVVFKKTEKTSLKNEPDSVVPADDKNESVSITELQ
TNVIKVLNDVSKTLTCHTWKPAGVTTQANSRPRKPTIIRTKSWKPNILMKSKITPLSTLK
TKNPRFIVSPIKMLTNLNGLMTKCTVVRAGSITEKLQKIVNDLKADAERTSPLHGSNILM
KKPVVPIKQLPESKPKVTLAENNSCFSSSIQSKQPVEVISKLCKVCKNKNEPLKMMQCFK
CNYHYHIWCCDPPRTCVPKPSKFSYWVCSNCTPNGSDEENPQGGLEVAPDGRKRITRCRK
PPEKFVNTIHMANAMHNARIRKTRCMASRRKRKKSKPEIPQQCNTTTQPPYIHKLPPLSI
PAVDTPSMDRCENTTPTTTASSTVTSSLESSSTTTYIIKQPAMPAIAPIDPITTQLIVRK
EVKLAEMKPPIKPETSTSPTNEKNFIKVTLSTTRPSTSILLPIASHKKTVSLPKITFKPS
PIQTVLINNPNGSNPKCGPLVTTLPQSTVQTSPHNLPTSNSGNAGGV
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcatgtatcaaaccatgctgtcccgagctcctggaaaaaggaagataaagctc
caggaggagaacatcctgagattgatgcaggaagacgatcctgatgaggaagaggacatg
gattttgaggtggcccatgatcacgcagaacgaaatggatcagggagtgagtctgggacc
agtgacagtgcagaggatagcaattcctcatcaaatgaagaatctgaaagtgggaatgaa
aatgaaccatctacctcaaagaaactgccaaaacgtacacagtataatgataatggcatt
ccaagttcgttcaaggaccatggcagtgtacctacaatcaaatctaccaatgagatgata
aattcaaagtattataatgtacctcaccctatagtggatgtattaaaaaaagcagagaag
caattgaaagtatccacctcttatgtaaaacggaatgttgatctatctcaagtaaggacg
tgctgtatttgtttaaagcacaatgaatctgcacacttgctcacctgccacaagtgcttc
ataactgttcataaagaatgttgcagaactagaaaattgaagtcaatgaaaaagtcttgg
ttctgtgatgtttgtatcagtgctcaaccgcagagttgtgagttgtgtccatccaaagaa
ggatgtttgaaagaaacaaacacaggacagtggtgtcatgttgtgtgtgcgaggtacatt
ttaaagagcaatattttttcatcaaattctaaatcaaatgtaatcgatttttcgaatctg
aactacaagttatatggaagtaaagaatgttatttatgcgaagatagacttgtttctaaa
acaggtatctgtgttaaatgtgatgctggtttatgtaaagtatattttcatgtgacttgt
gcacagaagcatggattgttgtcagagaatgagacaggcatgaacagtgccacggatccc
tactttgtgtactgtccgcaccatgttaacaaagaagatgtggaaacgtcacaaaaagtt
tccctggcttgttttgctgctgttaaatatgcgtgtaaacgaaaaaagttaaactcaaac
cgtaagatccgtctcaataaatgcacacagcgttacatcttttcattaaatgagcgtccc
aaattacccctcaaacctggtcccccaccaaccaggctattatccacaaatgcagaagca
ctgttgcaactaaacaagaaagcagagttaatttacaacattgatgttaggagccccgcc
acttatttcccctccccatcaaaagtacgtcgaagacaccgtgttgccccgaacctcaca
ggagagtttgtgtcgcattatgctgatcgtgagctcaggatatctgaggcaaaggaaaga
attaacgaagaactggaaaaaaatcagctgcttatgacagaacagtcaaaattgcgacag
caatatgaagaggtacataacacattatttgaggagcgaagaaaacaacgggatttaaaa
acatcgtcacgacatctttgttcattgatattatcacttaaggaatgggcgaatctaaat
cataacaacctaagtgacaaaaaacatacaaatgctaaacgagctcgcttgtcccttcat
ccacttgttcatgttgtccaagatacagaagaagaaacatcggaatcaccaaaccaacca
ctggatgttgagttaaatggatccgactccgaagattacaacagaaacatgacatctcat
ctccttaaatcttgtaatatttgcaagtctgataacaaacaacatctaatggttgaatgt
gatgtttgcaaccaatggtcccaccttggctgtcttgatccacctcttacacagatgcca
agaaagactaagtttgccttgtggcaatgttcggagtgcgctccttccaatgatgttgca
acatccagtgaatctgatgatgatcagcatgggagtttgatcacagaggagggaagaaga
ttaacgcggaggattcatcgacctcccgaaaagttgtcaaccacgttgcttaatgatcaa
caactgtttgaacaaaggagaatgatgaattacatccagagaagtttcaagacaggcagt
ttaaagaagagaaaattatcaagagatcgtctgcgaatgctaaagaagaaatatatgtct
tctagcaataatcataaagtcaaaaccacatcctccagcgaacacacctcatcgaattca
atcgcgttaaagagttcaagtctaaagaaagaagtcgcctctctaccacctgttactgtc
accataggccaaaaaacattggaagatacaaaacccattgttacatcacaacctgtgttt
gtgaacaataaacacattagcccgcaagtgcaaattaaaccactggagaaaatgacctta
cccttacctataagtcatgttgtgttcaagaaaactgaaaaaacctcacttaagaatgaa
ccagatagtgttgtacctgcagatgacaaaaatgaatccgtttcaattacagaacttcaa
actaatgttattaaagttctaaacgatgtttcgaaaactttaacttgccatacatggaag
cctgcaggtgtaacaacacaagccaatagccgaccacgcaagccaactataatcagaact
aaatcttggaaacccaatattttaatgaagtcgaaaataacaccactgtcaactcttaag
acaaaaaatccgcggtttattgtctctccaataaagatgttaacaaacttgaacggtttg
atgacaaaatgcacggtggtgcgcgccggcagtattacagagaaactgcagaagattgta
aatgatttaaaagctgatgcagaaagaacttccccattacatggtagcaacattctaatg
aagaaacccgtggtaccaatcaaacaactgccagagtcgaaacctaaagttacacttgct
gaaaacaacagctgtttttccagctctattcaatccaaacaacctgttgaagttatatca
aagttgtgcaaagtttgtaagaacaagaacgaaccgttaaagatgatgcagtgtttcaaa
tgcaattaccactaccatatatggtgttgtgacccaccaagaacatgtgtaccaaaacca
agcaagttttcttattgggtttgttccaactgcacaccaaatggatccgatgaagagaat
cctcagggaggattggaggttgctcctgatggaaggaagaggatcacaagatgcaggaaa
cctccggaaaagtttgttaacactattcatatggctaatgcaatgcacaacgcccgaata
cgaaagacaagatgtatggcaagcagaaggaaacggaagaaatctaaacctgagatccct
cagcaatgtaacactaccacacaaccaccttatattcacaagcttccacccctgtccata
cctgcagtggatacaccaagcatggacagatgtgaaaacaccacacctaccacaactgca
tcaagtacagtcacaagtagtttggaatcaagttcaacaacgacttatataatcaaacag
cctgccatgccagcaattgcacctatagatcctatcacaactcaattgattgtgagaaaa
gaagtaaaactggctgaaatgaaaccaccaataaaaccagagacttctaccagcccaaca
aatgaaaaaaacttcattaaagtgacgctaagcacgacgagaccttcaacaagtatcttg
ctgcccatagcttcacataaaaagacagtcagcttaccaaagatcacctttaaaccatca
cccattcagactgtattgattaataatcccaatggttcaaacccaaaatgtggaccattg
gtcacaacattacctcaatctactgtacagactagccctcacaatttacctacatctaac
agtggcaatgctggaggtgtttaa
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