Ciona intestinalis (yellow sea squirt): 100179215
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Entry
100179215 CDS
T01056
Name
(RefSeq) programmed cell death protein 2
KO
K14801
pre-rRNA-processing protein TSR4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100179215
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100179215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDCD2_N
PDCD2_C
zf-MYND
Motif
Other DBs
NCBI-GeneID:
100179215
NCBI-ProteinID:
XP_002126749
Ensembl:
ENSCING00000013304
LinkDB
All DBs
Position
8:1556775..1560198
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AA seq
340 aa
AA seq
DB search
MELGFVEEPENTWRLLRCYFPSKVGGKPAWLDPEHLPSVDDMECGCCHKPLVFLLQLYSP
NDDKLDSFHRTIFVFCCTNGTCYSSENDAFPFKVFRSMLPKENDYYPADPPDYDEPNAIR
ECSQFTNLCGLCGNHGVKKCSRCREVQYCSKDHQVFHWKLLHKYQCSKPKDENNEVEMEK
SILFSEKELVIEPEPTAPKKENTESEFENLKNHIQSGDYTEEELNDAVANVKSDKAFEKF
QKQIAVEPEQVIRYQREGSVLWCSSENIPSKIPSCECGAQRQFEFQIMPQLLNHLKVDHS
IEGPTIDWGTVAIYTCHDDCNISPYIKEYCWLQHFSKEAI
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagttgggatttgtagaagagcctgaaaatacatggcgactgctgcgttgttacttc
cccagtaaagttggtgggaagccagcgtggttggatcccgaacatttaccttcagtagat
gacatggaatgtgggtgctgccacaaaccgttggtgtttctacttcaactgtattcccca
aatgatgacaagttagattctttccatcgcacaatatttgtcttctgctgcaccaacggg
acatgctacagcagtgaaaatgacgcttttcctttcaaagtgtttcggtccatgttacca
aaagagaatgattattaccctgctgatccaccagattatgatgaaccaaatgccatcaga
gaatgttcgcagttcacaaatttgtgtgggttgtgtggcaaccatggtgtgaagaaatgt
tcgcgctgtagagaagttcaatactgttcgaaagatcatcaagtttttcattggaagtta
ttacataagtatcaatgcagtaaaccaaaggatgaaaataatgaagttgaaatggaaaaa
tcgatcctgttttcagaaaaagaattggtgattgaacctgagcctacagcacccaagaag
gaaaatactgaaagcgaatttgaaaatttaaaaaatcacattcaatctggtgattacaca
gaagaagaacttaatgatgcggtcgcaaatgtcaaatcggacaaagcgtttgagaagttc
caaaaacaaattgctgtggagcctgaacaagtgatcagataccagagagaaggaagcgtg
ttatggtgttcaagtgagaatattcctagtaaaataccttcgtgtgaatgtggggcacaa
cggcagtttgaatttcagatcatgccccaattactaaaccacttgaaagttgaccattct
attgaaggtccgaccattgactggggtacagtggccatatatacatgtcatgacgattgt
aatatttcaccttatataaaggaatactgttggctgcaacacttttctaaagaagcgatt
taa
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