Ciona intestinalis (yellow sea squirt): 100179227
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Entry
100179227 CDS
T01056
Name
(RefSeq) mannose-binding lectin precursor
KO
K03991
mannose-binding lectin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100179227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100179227
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cin04091
]
100179227
Membrane trafficking [BR:
cin04131
]
Endocytosis
Phagocytosis
Opsonins
100179227
Lectins [BR:
cin04091
]
C-Type lectins
Collectins
100179227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
ABhydrolase-like_N
Motif
Other DBs
NCBI-GeneID:
100179227
NCBI-ProteinID:
NP_001161178
Ensembl:
ENSCING00000014252
UniProt:
D0QMC8
LinkDB
All DBs
Position
12:2738954..2740328
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AA seq
221 aa
AA seq
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MSSFKVCVVLFIGLCAVVHARAQTYLTCSDSAPPLKGDRGPPGPAGPPGAKGPKGDTGVT
VDLEIRMQDFETRLAKLEGQTCQGTKVINGKTWYGPGNGYFYFVIAKDMRYKQAKAQCGK
FQATLAVHAPRNQDVMKVLRKQITAITEEDYWIGLTDIKGEGNFVWEDGTPLKDSEANWY
KGEPNNIRGEDCVGSNFRDTSRWNDYPCSLRKLYALCERQG
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatttaaagtgtgcgtcgttctctttatcggtttgtgtgcagttgtacacgct
agagcccaaacttacctgacgtgctcagatagtgcaccgccgcttaagggcgatcgaggg
ccacctgggcctgcgggaccacctggcgcaaaaggtccaaaaggagacactggcgtcaca
gtagacttagagataaggatgcaagacttcgagacacgtttggcaaagcttgagggccaa
acatgccaaggcacgaaagttattaatggaaaaacatggtacgggccaggaaacggttat
ttctacttcgttattgccaaagatatgcgttacaagcaagcgaaagcacagtgcgggaaa
tttcaagccacccttgcggtacatgcacccaggaaccaagatgttatgaaagttcttcgc
aaacagataacggctattacagaagaggattactggatcggtctcaccgatataaaagga
gaggggaatttcgtctgggaggacggcacaccattaaaggacagtgaggccaactggtat
aaaggagaaccaaacaatattagaggcgaagactgtgtaggcagcaactttagagatact
tcacggtggaacgactacccatgctccctccgcaaattatacgcactctgcgaacgtcaa
ggctaa
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