Ciona intestinalis (yellow sea squirt): 100179246
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Entry
100179246 CDS
T01056
Name
(RefSeq) centrin-3-like
KO
K16466
centrin-3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100179246
03036 Chromosome and associated proteins [BR:
cin03036
]
100179246
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
100179246
Nuclear pore complex
100179246
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
100179246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_9
EF-hand_5
AIF-1
EH
SPARC_Ca_bdg
UPF0231
NNH2
MgtE_N
BAHCC1-like_Tudor
Motif
Other DBs
NCBI-GeneID:
100179246
NCBI-ProteinID:
XP_018670064
Ensembl:
ENSCING00000023332
LinkDB
All DBs
Position
12:4664157..4670579
Genome browser
AA seq
167 aa
AA seq
DB search
MSLSLRNELGLEKSKRRKRRELTNEQKQEIKEAFELFDTDKDQRIDYHELKVVMRALGFE
VKKADVLKVLRDYDREGSGTIGFDDYNEVITEWMLERDPQEELGKAFKLFDDDDTGKISL
RNLRRVARELGETMPEEELRSMIDEFDADGDGEINLEEFIALMTGDT
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtctctgagaaatgagcttggtttggagaaatctaagcgaagaaagcgcaga
gaactcaccaatgaacaaaagcaagaaattaaagaagcttttgaactcttcgatacagac
aaggaccaaagaattgattatcatgagttgaaagttgtgatgagggctcttgggttcgag
gtgaaaaaagctgatgttttaaaagtgctgagagattacgatcgtgaggggtcaggcacg
ataggtttcgacgattacaacgaagtcatcacagagtggatgttagagagagatcctcaa
gaagaattaggcaaagcattcaagctgtttgatgatgatgacactggtaaaatctcactc
cgtaatttgcgaagagtcgcgagagagctcggagaaaccatgccggaggaagaacttcgt
tcgatgattgatgaatttgatgctgacggggatggtgagattaatctggaggagtttatt
gctcttatgacaggggatacctag
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