Ciona intestinalis (yellow sea squirt): 100179261
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Entry
100179261 CDS
T01056
Name
(RefSeq) dehydrodolichyl diphosphate synthase complex subunit DHDDS-like isoform X1
KO
K11778
ditrans,polycis-polyprenyl diphosphate synthase [EC:
2.5.1.87
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00900
Terpenoid backbone biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
100179261
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cin01006
]
100179261
Enzymes [BR:
cin01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.87 ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific]
100179261
Prenyltransferases [BR:
cin01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
100179261
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prenyltransf
Ins_P5_2-kin
DUF6925
PIG-L
Motif
Other DBs
NCBI-GeneID:
100179261
NCBI-ProteinID:
XP_002120306
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All DBs
Position
5:complement(2538239..2539963)
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AA seq
328 aa
AA seq
DB search
MSKVYVQRGNFNVDRRFFVRKVMALVCKERLPWYHRLYSSILKVGPIPKHLAFIMDGNRR
YAVKKHVERIEGHSQGFDKLAEVLQWCQELGVEEVTVYAFSAENFKRSKEEVDSLMELAR
TKFERILKEKDKLEELGVRLCVVGELDMLPDSLQTLAKQLITTTKNNYKCKLNVCAAYTS
RLEMTQAVRDIKWGVDEGLIYVSDISERLMDKTLQIPKVDLLIRTSGEVRLSDFLLWQSS
LSYLSFLRHLWPEMTIWDFYGAILLYQQSYKYKKQEEEEHEEELRKEELMMVSNENNQEE
ALKMRKNRINNFIIKLNEKRLANCMTDS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtatatgtacagcgtggcaatttcaacgtagacagacgtttctttgtgagg
aaagtcatggcattggtgtgcaaagaaagattgccatggtaccaccggttgtattcgtca
atcctgaaagtaggacctataccaaaacatctggcatttattatggatggaaatcggaga
tacgcagttaaaaaacatgttgaaagaatagagggacattcacagggctttgacaagctt
gcagaggtcctacagtggtgtcaggagcttggtgtagaagaagtaactgtatatgctttt
agtgctgaaaattttaaacgttcaaaggaagaagtagacagcttgatggaactggcaagg
accaagttcgagaggattcttaaggagaaagataagctcgaggagcttggagtaaggtta
tgcgtagtgggagaacttgacatgttacctgacagtttacaaacacttgcaaagcaactg
attaccacgactaagaacaactataagtgtaaattaaacgtatgtgcagcgtatacatca
cgcttagaaatgacacaagctgtaagagacattaaatggggcgttgacgaaggtttgatt
tatgtaagtgacatcagtgagagactaatggataaaactttacaaatacccaaagttgat
ttgttgattcggacgtcaggtgaggttcgtctcagtgattttcttctctggcaaagttcg
ctttcctacctctcttttctaagacacctgtggccagaaatgacaatatgggacttctat
ggtgctattcttctgtatcaacagtcatacaagtacaagaaacaagaagaagaagagcac
gaggaagagctgcgtaaagaggagttaatgatggtctccaatgagaataatcaagaggaa
gcacttaagatgaggaaaaatcgcatcaacaactttatcataaaacttaatgaaaaaaga
cttgctaattgtatgactgattcctag
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