Ciona intestinalis (yellow sea squirt): 100179273
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Entry
100179273 CDS
T01056
Name
(RefSeq) something about silencing protein 10 isoform X1
KO
K14767
U3 small nucleolar RNA-associated protein 3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100179273
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100179273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sas10
Sas10_Utp3
Motif
Other DBs
NCBI-GeneID:
100179273
NCBI-ProteinID:
XP_002120979
Ensembl:
ENSCING00000007582
LinkDB
All DBs
Position
1:7959939..7966655
Genome browser
AA seq
460 aa
AA seq
DB search
MKTRASRSNTAQKKKLTRVEKEEHIDEPDKEAEDYLYDEVDKFHASKDKMLFHEDEDSDA
EDDLEEEVLGVDGSDVESSEEEEEEGASDEDVEMSDESQDDEHGIPSSKAWGKKKSMFYG
GESLEGLQGFERDEAADLEEEEALRIQRRLNEEIDEDQFELIEPTQEPFETDSLKKDNKP
VNVIRSDFSNLSTPAQWKLLSKESPELKDLIKDFKLKITELNDRINPLLDLVTAGKITGN
GAIYVNTRFKLYTAYLINVAFYLSLKAKLSPVGNHPVVKRLVEYRTLINELEPLDEELEG
QVDELLNYNVHDTETESPEIEVLSNEKPTVAVEQDDNEETGRKIKELGAVDPLKYYTALQ
ERLKLGSTQDARNEATEEMEPDAEDDDDRRAINYTMSKNKGAHTKRRKLDRNPRVKHREM
YRKAKIRRRGQIRTFRPEIEKYSGEASGIRAGVVRGVRIR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaagagcatctcgcagtaacaccgctcaaaagaaaaagttaacaagagtggag
aaagaagaacatatagatgaaccagataaggaagcagaggattacctctatgatgaagtg
gacaagttccacgcaagtaaagataagatgttgttccatgaggacgaggactctgatgca
gaagatgacctagaggaagaagttcttggagtggatggaagtgatgttgagagcagcgag
gaggaagaggaagaaggagcatctgatgaagatgttgaaatgtcagatgaaagtcaagat
gatgaacacggtattccgagtagtaaagcttggggaaagaagaagtccatgttttatgga
ggagaatctctagaaggattacagggtttcgaacgagatgaagctgctgatcttgaagaa
gaggaggcccttcgcatccagagaagactcaatgaagagattgatgaagatcagtttgaa
ctgattgaaccaactcaggagccttttgaaactgacagcttgaagaaagataacaaacct
gtcaacgttattcggtcagattttagtaatttatcaacaccagctcagtggaaactttta
agcaaagaatcgccagagcttaaagacttaattaaggattttaaattaaaaatcaccgag
ctaaatgaccgaatcaaccctttactggatctggtaactgctggcaaaataacgggcaac
ggcgcaatctacgtgaacaccagattcaaactgtataccgcgtatcttatcaacgttgcg
ttctacctctcgttaaaggccaaattatctccagttggaaatcaccctgtggtgaaacga
ctcgttgagtacagaacgcttatcaacgagcttgagccgttagatgaagaattagaaggg
caggtggatgaactattaaactacaacgtgcacgataccgaaactgaatctcccgaaatt
gaagttttaagtaacgaaaaaccgaccgtggctgttgaacaggacgataacgaagagacc
ggtcgaaaaattaaggaactaggcgctgtggacccgttgaaatactacaccgcgttacag
gaacgacttaaactcggttcaacacaggacgcacgaaatgaagcgactgaagaaatggaa
ccagatgctgaagacgacgatgatcgcagagcaatcaactatacgatgagtaaaaataag
ggcgcgcacacgaagcgtcgaaaattagatcgaaatccacgcgtaaagcaccgggagatg
tatcggaaagcaaagattcgacgtcgtggacaaatacgaacctttaggcccgaaatagaa
aagtattcaggcgaagcctcggggatacgagccggtgttgtccgaggcgtccgaatacga
taa
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