Ciona intestinalis (yellow sea squirt): 100179285
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Entry
100179285 CDS
T01056
Name
(RefSeq) trichohyalin
KO
K25138
ankyrin repeat domain-containing protein 26
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100179285
Cilium and associated proteins [BR:
cin03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100179285
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
100179285
NCBI-ProteinID:
XP_018667491
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All DBs
Position
5:2124877..2150173
Genome browser
AA seq
1856 aa
AA seq
DB search
MFKKRLFKKNKKSASEVGSLASGKSSSGYEVSPKKDLGKLHKAAFEGNLTKLKSLLKKGD
VNLLDKENRTPLHLACANGKIDAVKMLVDYPNCNLNLCDNDRRSALMKCVQCQYQNCMNI
LLQKGADISLSDVNGNTALHLAVSIPSVDLCYLLLDYSADVHAKNKDGSTPLHIAATVDG
SEDTIKLLLDDGAQINSAEGKGKTPLMLAASRGNLDIVKTFLSKGADATIRDKHLGWTAD
QYASVNGHHPISHIIVEHTTRNKSRPASSGSLRSPQGASSPIYSTVAPSSSRHTPTDIVD
HDTSQEDDTPTPSESDAKSLSDTSESDSPPEKAQPAKPKLNVAQFLKQRELMKQNQSTGN
VKTTNIPPKVEHQMENSESESEEEKSPIRARGYQSKSQKIGSSVSPAKPPLPKPQTSQTE
ASSKPPPEEDDSPWDTDDEDEEEEGEVVKKEEEKVFPQSKGHSKPDTNMLASLGFSADEV
NDVYGGDSDSTFDSQSQIISSKHDHVNGTKHSDHDLWDDEEHEQTPVHKNITDKFFTVAS
DYKFDDELSEDGSVEALVAPTNIKRKVTPEIKKENKEEEREEDSSSWDSDDVQEKVSPQK
QSPSTQSPFRTSAAKVVTPLLHNNEDDDVTDSESESSWEVEAKNKRKPTKEQLEWMEEQE
KERERELQEKEEEKKKLKALAVEASERHVKKEREKKEIEQKEKEKREKEKRDKEKKEREE
KEKRDQEKRKREEKERLEAIKVEEERKRIAREEKIRKKKLEEETLQNQLQEREKLQSALQ
DALNDDANLSVSDESELDDSYMGNTANGTKDKMGDIRTTMSNGLLDQDLIFDPILDVKRN
GRLNNHLDLDNLTTTETETEDEVPGDIPASLRSSQLSESLLRSGERGELEREAAKEKRRA
INALEKLEFYKKENNELKEQIKDNKRERDHLEKGGSEKETNLRKLTFELNRAKDQLETLQ
LDLNMERDHVKRLSEQLEIEGSNRRQQEINLRDIRGELKNSEQSIKKLEQHRDDLLKEMN
TEKQKITIREKVDQEKQKIQHEMNEDMHQDRRVQTLNLLMMEKEQELSSLKAERDSLSDS
CKRYKEELTKWRNTDADKQDMLVNFNEELNNKVDELTKEVRENDELLMQSTLRSKFELDN
LNQANKALTEQLKKERNEKEVSMKDLETLNEQQRELKRVIDELRSTNQRKEDQLTKLNEE
INEARQKRENSESKQHAADIACNLAQHEANTVRTTLTHKETLLAQLEREREELKEQVRRS
ESEKSEMQRENARLDGRVELLQADVSQQESERARLRRELEDARNFGITNMNSQQGKFSDI
VSEHHTERLEYEKQNVKLKQQVAHLSKEIEQIREEKIKKEESLALAQQDVIDTDKKLHFT
DSSMKQLAESQRHLQEEKERTQTELQLVKAKADSMLNRVEELSQLSTTLRRELDDEKLTS
SNLQREVQSLQAIRSHDQDNLSRLEASLRESEVKVIRLQSDLTNSTRRESESKDDHEVLT
RSRMQMEQLIGRLQEEKGEAERKLQSQEERCRLLQSEADGHRQMWETEVKTRSKLSIDYA
RMEKEKQEAYQRMETSHRKLAKVSGVGKEYKIKYEDQKRRRMKLEDRIESMSDSSISEAE
RERDEIKLELQKLRRTLKQNGKSPSNEVVNAQITEKLEQVNNWLEHHEKSREQLEQMRRE
NEEKRLMEEKSRVASLERELSETRSRSLGLEDSDMTRRLQEKVRENISLHESLRRTKQDL
EEHKVKLNNERTKYQSLYISSTAGNPTPSIPRVSAFNIGMQNGHSQVGGFTSTPRKDLSQ
PYLSQFRNKLEASISQCLADTRPHSASPILDGTGSYHRKPAETSFGRPTANDYFVP
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaaacgcttgttcaagaaaaataagaaatctgcttcagaagttggaagttta
gccagcgggaaatcttcatctggatatgaggtgtctcctaaaaaagatctcggaaaattg
cacaaagctgcgtttgaaggaaatttgacgaaactgaaatcacttttgaaaaaaggcgat
gtaaacttgttagataaagaaaacagaacccctctacaccttgcatgcgccaatggtaaa
atagatgctgtcaagatgcttgttgattatcccaactgtaacttgaacctgtgtgataac
gaccgacgctcagcattaatgaagtgcgtccaatgtcagtatcagaactgcatgaatatt
ttgctccaaaaaggtgcggacattagtttgtcagatgtaaacggcaacactgctctacac
cttgctgtcagcattcccagtgttgacctttgttatttactgctggactacagtgctgat
gtgcatgccaaaaacaaggatggttcaaccccactacatattgctgccacagttgatggg
tcagaagatacaatcaaacttttattagatgatggagctcaaattaactcagcggaaggc
aagggaaaaacaccactgatgttggctgccagtcgtggaaatcttgatattgtgaaaact
tttttaagcaaaggagcagatgcaacaattcgtgataaacatttaggatggacggctgac
caatatgcaagcgtgaatggacaccatccaatatctcacatcattgtggagcacacaacg
aggaataaaagtcgtcccgcatcctcaggatcgctccggagtcctcaaggagcatcttcc
cccatctactcaactgtagctccttcttcttcacgacatacaccaactgacattgttgat
cacgacacgtcacaagaagacgacaccccaacacccagtgaatctgatgcaaaaagttta
tcggatacttctgagtcagattcaccacctgaaaaagcacagcctgccaaaccgaaactc
aacgttgcgcagtttttgaaacagcgagaattaatgaagcagaaccagtcgactggcaac
gtaaaaaccacaaatattccaccaaaagttgaacatcagatggaaaactctgagtctgaa
tcagaagaagagaaatcccctataagagcaagaggataccaaagcaaatcacagaaaatc
ggttcttcagtgtcaccagctaaacctccgcttcctaaacctcaaacctcacaaactgag
gcgtcttctaagcctcctcctgaagaggatgactcaccatgggacacagatgatgaggat
gaagaagaggaaggtgaagttgtgaaaaaagaagaagaaaaagtttttccacaaagtaaa
ggtcactcaaaaccagatacaaatatgttggcatcgcttggattcagtgcagatgaagtt
aatgatgtttatggtggtgatagcgattctactttcgactcacaatcacagatcatatca
tctaaacatgatcacgtgaatggtacaaagcattctgatcacgatttatgggatgatgag
gaacatgagcaaactcccgtgcacaaaaatataactgacaagtttttcacggttgcttcc
gattacaagttcgatgatgaattgagtgaagatggttccgtggaagctcttgttgctccc
actaatataaagaggaaagtaactcctgagataaagaaagagaataaggaggaggagaga
gaggaagattcatcttcatgggattctgatgatgtacaagagaaagtttctccccaaaaa
caatccccaagtactcaatctccgtttaggacttcagctgccaaagttgtgacgccattg
ttacataacaatgaagatgatgatgtcactgatagcgaatcagaaagtagttgggaagtt
gaagcaaagaacaaaaggaaacctacgaaagagcaattagagtggatggaggaacaagag
aaagaaagagaaagagaattacaagagaaagaggaggaaaagaagaagttaaaagctctt
gcagtggaagcaagtgagcggcatgtgaagaaggagagagagaaaaaagagatagagcaa
aaggaaaaggagaaaagggaaaaagagaaaagggataaagagaaaaaggagagagaagaa
aaagagaaaagggatcaagagaaaaggaagagagaagaaaaagagagacttgaagcaata
aaagtggaagaagagagaaagcgaattgcgagagaagagaaaataagaaaaaagaaactt
gaagaagagactttgcaaaaccaactgcaagaacgagaaaagttacaaagtgctttacaa
gatgctttgaatgatgatgccaatttaagtgtatctgatgaatctgaactagatgattca
tatatgggcaacactgcaaatggaactaaagacaaaatgggcgacatcagaacaacaatg
tcaaacggacttcttgatcaagatttaatttttgatccgatattggacgtgaagaggaat
ggaagattgaacaatcatcttgatcttgataatctcaccaccacagagacggagacagag
gatgaagtcccgggagacatccccgcatccctaaggtcatcacaattatcagaatcgttg
ttacgctctggcgagcgtggtgaactggagcgtgaagcagcgaaggaaaaaaggagagct
atcaacgctcttgaaaaactggagttttataaaaaagagaataacgaactaaaggagcag
atcaaggataataaaagagaaagagatcatttggagaagggtgggagtgagaaagaaacc
aatttaagaaaattaacattcgaattaaatcgagcaaaagatcaattagaaaccttacaa
cttgatttgaacatggagcgtgaccatgttaaacgcttgagcgaacagcttgaaatagaa
gggagtaaccgaagacaacaagaaattaatcttcgggatattagaggggaacttaagaat
tcagaacaatcaataaaaaagcttgaacagcatcgagatgatttactgaaggaaatgaac
actgagaaacaaaaaatcacaattcgtgaaaaagttgaccaagaaaaacagaaaattcag
cacgaaatgaatgaagatatgcaccaagacaggagagttcaaactttaaacttgctaatg
atggaaaaagaacaagaattatcgagtctaaaagctgaaagagatagtctaagtgattct
tgtaaaagatacaaagaggaacttacaaaatggagaaacacagatgctgataaacaagac
atgttggtcaactttaacgaagaattaaataacaaggttgatgaattaacaaaggaagtt
cgtgaaaacgacgaattgttgatgcaatctacgttgcggtccaagtttgaactagataac
ttgaatcaagcaaataaagcattgactgaacaactaaaaaaagaacgcaacgaaaaagaa
gtttcaatgaaagatcttgaaactttaaatgaacagcagagggagctaaagagggtgatc
gatgaattaagatcgaccaatcagagaaaagaagatcagctgactaaattaaatgaagaa
atcaatgaagcacgacaaaaacgagaaaactctgagagtaagcagcatgctgcagacatt
gcttgtaacttggctcaacatgaagcaaacactgtacgtacaacactcactcataaggag
acgcttcttgctcaacttgaaagagaaagggaggagctgaaggagcaagttaggaggagt
gagagtgagaaaagtgagatgcagagagaaaatgcaagattggacggcagagtggaatta
ttacaagctgatgtttcccaacaagagagcgaacgagcgagattacgtcgagaattggaa
gatgcgagaaactttgggatcactaacatgaattctcaacaaggaaaattctcggacatt
gtatcagagcatcacaccgaacgactggaatacgaaaaacaaaacgttaaactaaaacag
caggtggcgcacttgagcaaggagattgaacaaatacgagaagaaaaaatcaaaaaggag
gaatcgcttgcattggcgcaacaagacgttattgacaccgataaaaaattacattttact
gactcatccatgaagcaacttgctgagtcacaaaggcatctgcaagaagaaaaagaacga
acgcagacggaacttcaacttgttaaagcgaaagctgattcaatgttgaaccgtgttgaa
gagttaagtcaactttcaacaacattgcgacgtgaacttgacgacgagaaactaacatca
tccaacctacaacgagaggtccaatcactgcaagccattagatcacatgaccaagataac
ctctcgagattggaggcaagtttgagggagtcagaagttaaagttatcagattgcaatcc
gatctgacaaactcgacgaggagagaaagtgaatcaaaagacgatcatgaggtgctcacg
agatcacggatgcagatggagcaactgatcgggaggttgcaggaggagaaaggagaagca
gagaggaagttacaaagtcaagaagaaagatgcaggctcctccaatcagaagctgatggt
catcgtcaaatgtgggaaaccgaggtgaaaacgagatcaaaattatccattgattacgca
aggatggagaaagaaaaacaggaggcgtaccaacgcatggaaacatcacataggaagctg
gccaaagtatctggggtgggaaaggagtataagattaaatatgaagatcagaaaaggagg
aggatgaagttggaggataggattgaatcaatgagcgattcctcgatcagtgaagcagag
cgtgaaagagatgagattaagttggaacttcagaagttacgaagaacgcttaaacagaat
gggaagtcaccaagtaatgaagtggtgaatgcgcaaatcaccgagaaattggagcaagtt
aataattggcttgagcatcacgaaaaatcccgagagcagttggagcaaatgaggagagaa
aatgaagagaaaaggttgatggaggaaaaatcccgagtcgcatccttggagagggagttg
agtgaaacgaggagcagaagtctggggttggaggactctgatatgacgaggaggttgcaa
gaaaaagtccgggaaaatatttcgttgcatgaaagtttacgaagaacaaagcaagatttg
gaagaacacaaagtgaaactaaataacgaacgaacaaaatatcaatccctctacataagt
tcaactgctggtaaccccacaccatctatacctcgtgtttcagctttcaatattggtatg
cagaatggacattcccaggttggggggttcacctcaaccccaagaaaggatttgagtcag
ccatatttgtcacagtttcgcaacaaacttgaagcaagcatcagtcagtgccttgcagat
actagacctcattctgcttcccctattctggatggaaccggttcttaccacagaaaaccg
gcggaaaccagttttggtcgtcccacagctaatgattattttgttccatga
DBGET
integrated database retrieval system