Ciona intestinalis (yellow sea squirt): 100179322 Help Entry 100179322         CDS       T01056                                  Name (RefSeq) alpha-actinin-2 isoform X1   KO K05699   actinin alpha 1/4 Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin04517   IgSF CAM signaling cin04518   Integrin signaling cin04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:cin00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     100179322    04518 Integrin signaling     100179322    04519 Cadherin signaling     100179322  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cin04131]     100179322   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:cin04812]     100179322    04147 Exosome [BR:cin04147]     100179322 Membrane trafficking [BR:cin04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     100179322 Cytoskeleton proteins [BR:cin04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      100179322 Exosome [BR:cin04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    100179322   Exosomal proteins of colorectal cancer cells    100179322   Exosomal proteins of bladder cancer cells    100179322 SSDB OrthologParalogGFIT Motif Pfam:  CH Spectrin EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 CAMSAP_CH Uds1 Pox_VERT_large FrvR_4th U3_assoc_6 RNR_Alpha EF-hand_5 Motif Other DBs NCBI-GeneID:  100179322 NCBI-ProteinID:  XP_002130676 Ensembl:  ENSCING00000023187 LinkDB All DBs Position 11:4007029..4023435 Genome browser AA seq 888 aa AA seqDB search MDEQQYMQQEEGWDREGLLDPAWERQQRKTFTAWCNSHLRKAGTQIEHIEEDFRNGLKLM LLLEVISGEQLPKPDRGKMRFHKIANVNKALEFIASKGVRLVSIGAEEIVDGNAKMTLGM IWTIILRFAIQDISVEESSAKEGLLLWCQRKTAPYKNVNVQNFHMSWKDGLAFCALIHRH RPDLIDYDKLRKDDPLTNLQTAFEVAEKHLDIPQMLDAQELVEMAKPDERAIMTYVSCYY HAFSGAQKAETAANRILKVLGLNQENERLMDEYERLASDLLEWIERMKPWLEDRTTDNTM EGVQRKLDDFRDYRVKQKPPKTEEKGHLEAAYNTLQTKLRLSNRPAFMPSEGKLVQDIAN AWKGLEGAEKGYEEWLLAEMRRLERLDHLAKKFYHKAGIHQKWSRGQEEALASEDYKVCT FQEVKALMKKHEAFESDLAAHQDRVEQIAAIGQELNDLDYHDARTINDSCAAICNEWDRL GDATQKRRTALENIEQILDSIEQQHLEFAKRAAPFNNWLDGAKEDLEDMFIVHSIDEIKG LIEAHVSFKDTLPQAQKEEESISALVQNIKKIQRQYGLPEQVCVNTYSTISEEELREKWR TVCDMVPVRDASLQTELSKQKRHELLRNEFAQIANELYPWITKITKDTNRISMEMVGSLE EVKNSLVEFQQKMVAQVPKLEALEKKHQEMQDELVFDNILTPHTMEAIHTAWEHLKTTIA LTINEVENQILMRDAKGLTQEQMNEFRSSFNHFDRDSSGVLNQEEFNGCLTSLGYEVDRK KEKGEAEFQRIMALVDPSGTNNVTFQSFIDFMTRESTDSDTAEQVVESFRILAGDKPYIT AQELRNELPPDQAEYCISRMSRYSAGDAPGDALDYESFSTALYGESDL NT seq 2667 nt NT seq  +upstreamnt  +downstreamnt atggatgaacagcagtatatgcaacaggaggaaggatgggacagagaaggactcctcgac ccagcgtgggagagacagcaacggaagaccttcacagcctggtgcaactcccaccttagg aaggctggcacacagattgagcatatcgaggaggattttcgtaacggactgaaactcatg ttgttattggaggtgatatccggggaacaactgccaaaacctgaccgtggtaaaatgagg ttccacaagattgccaacgttaacaaagctctggagtttattgcaagcaaaggagttcgc ttggtgtctattggtgcagaagaaatcgtggacgggaatgcaaagatgacactgggtatg atctggaccattatcctcagattcgctatccaagatatctcagtggaagaatcttctgcc aaagaaggattattgttgtggtgtcaacgtaaaactgccccatacaagaatgttaacgtg cagaacttccatatgagctggaaagatggtttggctttctgtgcccttattcacaggcat agaccagatcttatcgactatgataaactacgaaaggacgacccattgaccaatctgcaa acagcgtttgaagtcgcagagaaacatcttgacatcccacagatgttggacgctcaagaa cttgtagaaatggccaagcctgatgaaagagctataatgacatacgtatcatgctactac catgcgttctctggggcacagaaggccgaaactgcagcaaacaggatcttgaaggttctt ggtttgaaccaggagaatgaaagattgatggatgagtatgagagacttgcatctgatttg ctggagtggattgaaagaatgaagccgtggcttgaagaccgtaccacggacaacaccatg gaaggcgtgcaaagaaaacttgacgacttcagagattacagagtgaagcagaaaccacca aagactgaagagaaaggtcatttggaggcagcatacaacactctgcagacgaagcttcgt ctcagcaatcgaccagcgttcatgccatcggagggcaagttggtacaagatatcgcgaat gcatggaaaggattggaaggagcagagaaaggatatgaagagtggctgcttgctgagatg agaaggttagagcgacttgaccatcttgccaagaagttttaccacaaagctggaattcat cagaagtggtctcgtggtcaggaagaagctctcgcatcagaggattataaagtttgcacc ttccaagaagtcaaggctttgatgaaaaaacatgaagcgtttgaaagtgatttggctgcc catcaagacagagttgaacaaattgctgctattggtcaagaactcaatgatcttgactac cacgatgctcgtaccatcaatgatagttgtgcagccatctgtaatgaatgggatcgactt ggtgatgcaactcaaaagcgaagaactgctcttgagaacatcgagcaaatcttggattcc attgagcagcaacatctggagtttgccaaaagagccgctcccttcaacaactggttggat ggagcaaaggaagacttggaagatatgtttatcgtgcattctattgacgagattaagggc ttgattgaagctcatgtctcgttcaaagacacgcttccacaagcacagaaggaagaggaa agcatcagcgctcttgtacagaacattaagaagatacagcgacaatatggcttgcctgaa caagtctgtgtcaacacgtactcaactatttccgaagaggaacttcgagaaaagtggagg acagtgtgtgacatggtccctgtgcgtgacgcttcactacaaactgaactaagcaaacag aaacgccacgaactgctaagaaacgaattcgctcagatcgccaacgaactttatccatgg attactaagatcacaaaggacaccaaccgtatctcaatggaaatggttggctcactggaa gaagtaaagaatagtctcgttgagttccaacagaagatggtcgctcaagttcctaaactt gaagctttggagaagaaacaccaggaaatgcaagacgagttagtgtttgataacatatta accccacataccatggaagcgatccacacagcgtgggaacatcttaaaacaacaatcgcg ctcacaattaacgaggttgagaaccaaatcctcatgcgcgatgccaagggattgacacaa gaacaaatgaacgagttccgatcttcattcaaccatttcgaccgggatagttcgggagtt cttaaccaagaagaatttaacggttgtctaacctcgcttgggtatgaggtggatagaaag aaagagaagggtgaagccgagttccaacgtatcatggcacttgttgatccaagtggaaca aacaacgttactttccaaagtttcattgacttcatgacccgtgaaagcacggattctgac acggccgaacaagttgtcgaatctttccgtattctcgccggtgacaagccttacatcact gcccaagagttgagaaacgagttgccacccgatcaggccgagtattgcatcagtcgtatg tctcgttacagcgcaggggatgcaccaggcgatgcactcgactacgaaagcttctctacc gccctctatggggagtctgatctttaa

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