Ciona intestinalis (yellow sea squirt): 100179370
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Entry
100179370 CDS
T01056
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12-like protein isoform X1
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cin03021
]
100179370
Transcription machinery [BR:
cin03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
100179370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12
Motif
Other DBs
NCBI-GeneID:
100179370
NCBI-ProteinID:
XP_002121373
LinkDB
All DBs
Position
8:complement(3907448..3931096)
Genome browser
AA seq
2202 aa
AA seq
DB search
MSLLSFYQNRWLLRQRLGPADVYPQEAKQKEDELTSVNVKQGFINQPPFNEEYSSAHLYT
IDANKINQSFNQILTQKQVVTTFNDAGAGKRLKPQVYKEQFWLVPVINAKCRVHLQTWFK
DLIRGTSLLNLCRRVPVFSKKDDLFRTLSEYEVPMVRATWVIKITSAYHLTQTDAKIKKR
AANDPNLEWTQAICRFMREHLVKLNNDNNNQPNSNSSMNLSSGIETVCSVMNSQTMLTRE
DIEVMLKYISCLAHHMYSEGLFDRNEFLSWVVDEFECISLYDEIALSYFVPILQNYIEEV
TMNQLLARRMSFAAARHLSWLFIEGANSRSQSPALQSGNNTPGTSTPQLTRPTSVQLKQQ
CPEHLLSIAHTLACVIQCTVITCPGALVWYQPFDAKASGSPLDLLPCAPSDLPLPDIPKW
DTEALETDRLTRLLLQEQEADIVRRSRASEMKWSTDKCQESTTGHTINRVLSALEALDKQ
HFDRRPADSWGDPLDLLYHKIFDQGHGKDGDNQLTKSSEDAVIGLLCEWAISPKRLGEHR
AAVVAKLLELRQSHHEQVEYPDTTIETDTSLNTSVGGVINTSAPINNYQPNNHTNNVPYF
QNLLFTFLDQQAPELKNPKDGEETQSFKNLVLLFSELIEHDVFSHDIYMNTLISRGEISP
GDIGPLPSFNTGSVDGQMDSNQHLSNLPNFNNKQMEVKMEEEDPRCPDVGSMDFLTSNES
VFSPGECRSDRHFLDAVRSSMENPNKSSANFDASDGSYSNIWGHGQPRHVQYLMHFPISF
QEDGMTQEWNQRLMVLYGAGRLKTDVKRAVRKVTRHLTKLVQCKRTMDDGVDTNPTLTPS
GKKIKKSPKSSHIELLSRYRVLSYFDQHMITSTVAKSLLTAINNYIAGRSSCLPRLEVVL
LLFDLMEEALNVGGLVRTAVAIATRLADLANEIQRRKAETNSLNVEYVWYTTELSLAVVS
VLRHYISFLTLNMDLTFNAFEGLLDATKQSCISNPTQCASADRSVLVFLYDLYTSFGYIR
SQRSEAFGGYVASVRQALCSTKKPATTNCRYDQTFLQSFIDDPMAQSPLSVAEKYSGLLQ
DVSRRYSFVCSAVITVCNGHQDFEKVNALAVLCAEMNARCNELSSEWLGVLRALCFSSCT
VNFNDVLLIVEAGDAQIRDPLSLFTAVLIARGCLSLEDVIQHVAIPSLLAACKSRTSPDL
PNPDTSARLTCHLLLQLFKAPSSNKSSFRLPFSSDRHLLAAAQHSIAVGAVLAVLKGVLK
LGDARLSSGKNAFSHESELCVTSFLKPIGNLDDFDDLHMTGGQDIKNRKSGPSSSMDGAS
LSEFAKHAVRVICSQQWVREKCLKDPVMDLLMDQVLTREQRQNLIQLICYPENLLQVKLS
GLSNEPRKYVVSVLSGMTRWTFRQCLLELQVMLRQSPQEKSLPEHIAKATIEVFQQQQQQ
QNLDSTKERKSSLTGPELDRCNVWLVAPLVSKLPSQVQGRVLQEASAILEAPQNLSSTST
RSGAGARSERDNRQGGSSLLNHQPFLTLILTCLKGQDEQRDSLLESLQSQIVMLHSEWQD
ARSHRGSCKDLNNSQNCVHDALQLRLSLVGGMFDTVMSNSQWTSDVVVLLMQLIISGMVD
VQTNSELFDIVYDMIAVLLHHTLGGDCANKGEGSKREYINIVKKMKKEMGDKQTESIRRL
RQLLPITRPEVYVVCCEPSGAHMDIKGNKIPVPVDGNQGLQVTSKQKLNMWDVIEGLKHS
SPLCLAWFGARTIERKPMFYEEQHNLMLHHQHSRKRDLIDFLSPPQLPPEEEEEAELIPV
PTKIPDHKGSVLKNPFGASSASTEGMKQPPPKKKKKSRVRTSSEQNLPVPYRQTFSVAPN
PVPAGSLLNQMGTTSTQVNSFQHPNNFPNNPPNYPNYQQTNQQITSTYGANNFPPSAQQA
QAQSTHFKDRTRQALQLKLLSRHPAQGKTNTGHMGTQGYSDISKSVIRQRLEGHVRTSSH
VPSHDMYSNQPQSRQVGLQQHMINQGSVGYNSYNTPTPAMQQNQHGIMQGYNNSGYRNTN
PPNNQIGYQQSTNTSAQSNQQFMNQQQNANTAYGVSGIHPNSQQTAYSNPQQVSSGMGMI
GMGGQAGQPNQYGMTSMQRGTSQPTHMARMNQQQVHMGGSNVHQMNTGQNMQGTMNQRQV
MGHQSVMNPQQQYSTRMLNTQPQSNQLIDMRRNIHQQGPPPY
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgctaagcttctaccaaaacagatggttgttaaggcaaagacttggacctgca
gatgtttacccacaagaagcaaagcaaaaagaagatgaattgacgtcagttaacgttaaa
caaggtttcatcaaccaacccccatttaatgaggaatattcaagtgctcatctttataca
attgatgcaaacaagataaatcaaagcttcaaccaaattttgactcaaaagcaagtagtc
acaacttttaacgacgcaggagctggaaaacgactcaaacctcaagtttataaagaacaa
ttctggctggtgccagttatcaatgccaaatgtcgggttcatttacaaacttggttcaaa
gacttaattcgtggaacaagtttgttgaatttatgcagaagagttcctgtgtttagcaag
aaggatgatttgtttcgaacactatcagaatatgaagtaccgatggtccgtgcaacatgg
gtgatcaaaataacatctgcgtatcatctcacacaaactgatgcaaaaattaagaaaaga
gcggccaatgacccaaatctggaatggacacaagcaatctgcaggtttatgagggaacat
ttggtgaaattaaacaacgacaataataatcaaccaaacagcaatagttcaatgaattta
tcaagtggtattgaaactgtatgcagtgtaatgaacagccaaactatgctaactcgtgaa
gatattgaagttatgttgaaatatatcagttgtttggcacatcacatgtattctgagggc
ttatttgaccgaaatgaattcttatcatgggtggttgatgaatttgaatgtatttctcta
tatgatgaaattgcacttagttattttgttccaatattacaaaactatatagaggaagtg
accatgaatcaactattagcgagaagaatgtcatttgctgccgcacgccatctcagttgg
ttatttattgaaggagcaaactcaagatctcaatccccagctctgcagtcagggaataac
actcccggcactagcacaccccaactcacacgcccaacttcggtccaacttaaacaacaa
tgccccgaacacttgctgtccattgcccatacccttgcatgtgttatacaatgtacagtt
ataacatgtcctggtgctttggtgtggtatcaaccattcgatgcaaaagcaagtggttcg
ccattagatttgctcccatgcgcgccgtcggacctaccattgcctgatatacctaagtgg
gatactgaagcactcgaaacggacagattaaccaggttactacttcaagagcaagaggct
gatattgttcgtagatcaagagcttctgagatgaaatggtcaactgataagtgccaggag
tctacaacaggacacacgattaaccgagtgctaagtgcattagaagcattggacaaacaa
cattttgatcgtcgacctgcagattcatggggcgacccgttagatttactttatcataaa
atatttgaccaaggtcatggtaaagatggagacaaccagttgacaaaatcgagtgaagat
gcagttataggattattatgtgaatgggcaatatcacccaagcgtttgggagaacataga
gctgctgttgttgccaaactacttgagttacgacagtcgcaccatgaacaagttgaatat
ccagacacaacaattgagacggacacctcattaaatacatcggttggtggggttataaat
acttcagctccaatcaacaactaccaaccaaacaaccacacaaacaacgtaccatatttc
cagaaccttcttttcacttttttggaccaacaagctccagaattaaaaaaccctaaagac
ggtgaagaaactcaatcatttaaaaatcttgttcttctattctctgaactgattgaacat
gatgtgttttcacatgatatctacatgaacacactcatatcacgaggggaaatctcacca
ggcgacattggtccactaccttcattcaacacaggcagtgttgatggtcaaatggattct
aatcagcatttatcaaatctaccaaacttcaataacaaacagatggaagtaaaaatggag
gaagaagatcctcgatgtccggatgttggttcaatggacttccttacatccaatgaaagc
gtcttcagtcctggtgaatgtcgcagcgacagacatttcttggatgcggttcgttcctct
atggaaaacccgaataaatcgtcagcaaattttgacgcttctgatggaagttattcaaat
atatggggacatgggcaacctcgtcatgttcagtatctcatgcatttccccatttcattc
caagaggatggaatgacacaggaatggaaccagaggttgatggttttatatggtgctggt
aggttgaagactgacgtcaaacgtgcggttcgtaaagttacaagacatcttactaaactt
gttcaatgcaagagaactatggatgatggtgtagacacaaatcctactttaactcccagt
ggaaagaaaataaagaaatcaccaaaatcctctcatatcgaactgttatcgcgatatcga
gttctttcttattttgaccaacacatgatcacatcaactgtggccaaatcacttttaaca
gcaatcaacaactatatagctggcagatcatcatgtcttcctcgtttggaagttgttctt
cttctttttgatctcatggaggaagcgttaaatgttggaggacttgtaaggactgccgtt
gctatagcaactcgcttggctgatctagccaatgagattcagcgtagaaaagcagaaacc
aacagtttgaatgttgaatatgtttggtacacaaccgaactttcacttgctgttgtatca
gtattgagacattatataagttttctgacactcaacatggatcttacattcaatgcattt
gaaggactactcgatgcaacgaaacaatcttgcatctcaaacccaacacagtgcgcatct
gctgataggagtgtcctggtatttttatatgatctttatacatcgtttggttacatacga
tcacaacgatcggaagcatttggtggatacgttgcgagtgttagacaagctctctgttca
actaagaaaccagctacaacaaattgcagatatgatcaaacttttcttcaaagtttcatc
gacgacccaatggctcaatccccattgtcagtggctgaaaaatacagtggtttattacaa
gatgtatcgcgcagatacagctttgtgtgttccgctgttatcacagtctgtaatggacat
caagactttgaaaaagtaaatgcacttgctgttttatgtgctgaaatgaatgccagatgt
aatgagttgagttccgaatggctgggagtgttaagagctctctgtttctcttcgtgtacc
gtcaactttaatgacgttctcttaatagttgaggctggagatgctcaaatccgagatcct
ttatctctatttacagcagtgttaatagcaagaggttgtttatcattagaagatgttata
cagcatgtggccatcccttcactgcttgctgcttgtaaaagtcgaacttcaccagattta
ccgaaccctgatacaagtgccaggctgacatgccacctcctactccagttatttaaagct
ccaagttcaaataaatcaagtttccgtcttccattttcatccgaccgtcatcttcttgca
gctgcacaacacagtatagcagttggtgctgtacttgctgtgttgaagggggtgcttaaa
ctaggtgatgcaaggctatcaagtggtaagaatgctttttctcacgaaagtgaactttgt
gtgacaagtttcttgaaaccaattggaaatttggatgattttgacgaccttcatatgact
ggtggacaggatattaaaaatcggaagagtggcccatcttcttccatggacggagcaagt
ttgagtgaatttgccaaacacgccgttcgtgttatttgttcacaacaatgggttcgtgaa
aaatgtttaaaggatcctgtgatggatttacttatggaccaagtacttacaagagagcag
agacaaaatctcattcaacttatttgttatccggaaaatcttcttcaggttaaactctcg
ggactcagtaatgagccaagaaaatacgttgtgagcgttttgagtggtatgacgcgatgg
actttcagacaatgtcttcttgaattgcaagtcatgcttagacagtcaccacaagaaaag
agtttgcctgaacatattgctaaagccacaattgaagttttccaacagcaacaacaacag
cagaatctcgattcgacaaaagaaagaaaatcttcgcttactggtccagaacttgatcgt
tgcaatgtttggctggttgccccacttgttagtaaactaccatcacaggttcaaggaaga
gtcctccaggaggcgagtgcgatcctagaagctccacaaaacctctcctccacttctaca
aggagcggggctggagcaagatcggaaagagataatcggcaaggaggatcttctctcctc
aaccatcaaccattcctcacacttatattgacttgtctcaagggtcaagacgaacagcga
gactcattgttggaatctctacagtcacaaatagtgatgttgcattcagaatggcaagat
gctcgatcacatcggggctcgtgtaaggacttaaacaactcacaaaactgtgttcatgat
gctctgcaattaagattaagtctggttggtggaatgtttgacacagtgatgagcaactca
cagtggacaagtgatgtggtcgtacttctcatgcaacttattatatctggcatggtagat
gtacagacaaattctgagttatttgacattgtgtacgacatgatcgccgttctacttcac
catacgttgggcggggattgcgcaaataaaggagaaggaagcaaaagggaatatattaat
attgtcaaaaaaatgaagaaagaaatgggcgacaaacaaactgaaagtatccgaagattg
cgacaacttctcccgataactagacctgaggtttatgttgtatgttgtgaaccatcgggg
gcgcacatggatattaaaggaaataaaatcccagtccctgtggatgggaaccaaggcctt
caggtgacatccaagcaaaaactaaacatgtgggacgtgattgaaggattgaaacattcc
tccccactttgtctcgcatggttcggagctcggaccatcgaacgtaaaccaatgttttat
gaagaacaacataacttgatgttacaccaccaacacagtaggaaaagagatttgatagac
ttcctctctcctccacaacttcctccagaggaagaagaggaagctgagttgatccccgtt
cctactaagatcccggatcacaaaggatcagttttgaaaaatcccttcggagcatcctct
gcatccacggaaggaatgaaacaacctccgccaaagaagaaaaaaaaatcaagagttcgg
acttccagcgagcaaaacttacctgtcccgtaccgacaaacattctctgtcgccccgaac
cccgttcccgctggcagtttgttgaaccagatggggacgacatcaacacaagtcaattcg
tttcaacacccaaacaacttcccgaacaaccccccaaattaccccaactatcaacaaacg
aatcaacaaatcacgtcaacatacggggcaaacaatttcccaccttcagcacaacaagca
caggcgcaaagtacgcattttaaagaccgtacacgccaagctttgcaactcaaattatta
tcgcgacatccagcgcaaggtaaaactaacactgggcatatgggaacacaaggttattca
gatatttctaaatctgtgatcagacagcgcttagaagggcatgtgcgtacaagcagtcat
gttccttcacacgacatgtacagcaaccaaccacaatcacgacaagttggtttacagcaa
catatgataaaccaggggagtgtcggatataattcatacaacacgccaacacctgcaatg
caacaaaaccaacatggaattatgcaaggttataacaacagtggttaccgaaacaccaac
cctcccaacaaccagattggttaccaacaatcaaccaacaccagcgctcaatcaaaccag
cagttcatgaaccaacaacaaaacgctaacactgcttatggagtgagcggtatccaccca
aatagtcagcagactgcgtattcaaacccccagcaagtgagcagtggtatgggcatgata
ggcatgggtggacaagcaggacaaccaaaccaatatggcatgacgtcaatgcaacgtggg
accagtcaaccaacacacatggcgagaatgaaccaacagcaagtacatatgggtggtagt
aatgtacatcagatgaatactggtcaaaatatgcaaggcacaatgaaccaacgacaagtg
atgggacatcagtctgtaatgaatccacagcaacaatacagcacacgtatgttgaataca
caaccacaatcaaaccaactgatagatatgagaagaaatattcaccagcaaggaccccca
ccttactaa
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integrated database retrieval system
