Ciona intestinalis (yellow sea squirt): 100179371
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Entry
100179371 CDS
T01056
Name
(RefSeq) EGF-containing fibulin-like extracellular matrix protein 1
KO
K17340
fibulin 5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
100179371
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
100179371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
Fibulin_C
FXa_inhibition
hEGF
Motif
Other DBs
NCBI-GeneID:
100179371
NCBI-ProteinID:
XP_002125565
Ensembl:
ENSCING00000024090
UniProt:
H2Y3G1
LinkDB
All DBs
Position
11:4062506..4069233
Genome browser
AA seq
531 aa
AA seq
DB search
MNRLILLCIFTVLLHMVLGCPYHDRIQVLKQEQDARIKELMRRSGGSSLSLYTGRIDPVL
RKKYIHTDRTLRMKQDEIDRLNAFLLSIDSDYAEEPGHTHTHSTSSSSSASTGSSHGHSP
STGTSSTAGHSSHSASRRPASSSHRVNHRPTTSHSTSHSRPASSSRATSSSSSRTPSRSG
AHGTHTTSLNRPSTNYIGYNSHRGYIPRGRKTPGISVGFGSASTVYQPERYVACPGTRFH
VCPIGTTCERHGRTYRCVQRGQYRCPDGFERFNVSSTQYRCQDINECENVDLNHCEYDCL
NTHGSYRCTCDDGYSVMADGTCVDNDECAGSYHVCQNECRNTLGGYDCVCPQGYNKTEPG
GKYCQDINECLDEETCRTGEKCLNTFGSHECNVPQECEEGYLRKNTTGNEFGPCVVENYE
TDTHKPVSISHSRFALFSKYPMNREVAKMNYYRVSGHRYMFRVTEGSGYFRIVQQAGRNY
VTIKTRRRLIGPQVYRMKILVTDYDRTASDWRRRTITSRIDLEFIVSQYDF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtctaattctgctttgcatattcaccgtgttgttacacatggtgttgggatgt
ccttaccatgatcgtatccaagtattgaagcaagaacaggacgcccgtatcaaagagtta
atgcgacgaagcgggggtagcagtctgtcactatacacaggcagaatcgaccctgtgcta
cgtaaaaaatacattcatactgaccgaacgctccgtatgaaacaagatgagatcgaccga
ttgaacgctttcctgttgagcattgatagcgactatgcagaggaaccgggtcatacacac
acacatagcacatcaagcagttcttccgctagcacgggatcctcgcatggccatagcccg
agcactggaacgtccagcactgcaggtcattccagccattcagcttcaaggagaccagca
agctcctcacacagagtaaaccatcgtcccaccaccagccattccacaagccacagtaga
cctgcaagtagcagtagggccacctctagctcaagttcaaggacacccagccggtcggga
gctcacgggactcacacaacttccctcaacagaccgtcgacaaactacattggttacaac
tcgcatcgaggctacataccaaggggaagaaagacccctgggatctcagtcgggttcggg
tctgcatcgaccgtgtaccagccggaaagatacgttgcatgccctggcaccagattccat
gtttgtccaatcggaacaacctgcgagcgacacggtcgtacttacagatgtgtgcaacgt
gggcaatacagatgcccagatggatttgaaagattcaacgtatcttctacacaatataga
tgccaagacatcaacgaatgtgaaaacgtcgaccttaaccactgcgagtacgattgcttg
aacacacatggaagttacagatgtacatgtgatgatgggtacagtgttatggcggacgga
acatgtgttgataatgacgaatgtgctggcagttaccacgtatgccagaacgagtgcaga
aacacccttgggggttacgactgtgtgtgtcctcaaggttacaacaagactgagccaggc
ggtaaatactgtcaagacatcaacgagtgtttggatgaggaaacttgtcggaccggagaa
aaatgcttgaatacttttggatcgcatgaatgcaatgtgccgcaggaatgcgaggagggc
tatttgaggaaaaatacaactggaaacgaattcggaccatgcgttgtggaaaactacgag
accgacactcacaagccagtgtccatctcacacagcaggttcgctctgttttccaaatat
cctatgaatagagaggtcgccaaaatgaactattacagagtgtcaggccacagatacatg
ttcagggtaaccgaaggcagcggttacttcagaattgtccaacaagctggaagaaactac
gtcaccattaaaacacgtcgtcgactcattggacctcaagtgtatagaatgaagatacta
gtgaccgactacgacagaacagcaagcgattggagacgccgtaccatcacaagcaggata
gatctagaattcattgtttcgcaatacgacttttaa
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