KEGG   Ciona intestinalis (yellow sea squirt): 100179377
Entry
100179377         CDS       T01056                                 
Name
(RefSeq) syntaxin-12 isoform X1
  KO
K13813  syntaxin 12/13
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04145  Phagosome
Brite
KEGG Orthology (KO) [BR:cin00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100179377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100179377
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cin04147]
    100179377
Membrane trafficking [BR:cin04131]
 SNARE
  Syntaxin (Qa)
   Stx-Endo
    100179377
Exosome [BR:cin04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100179377
SSDB
Motif
Pfam: Syntaxin_2 SNARE Syntaxin CT398_CC Orf78 DUF5345 DUF6099 Baculo_11_kDa RIFIN DUF16 DUF919 DUF2116 DUF2207_C DNA_repr_REX1B DUF5344 PigL_N HsbA Tmemb_9
Other DBs
NCBI-GeneID: 100179377
NCBI-ProteinID: XP_026691180
Ensembl: ENSCING00000005620 ENSCING00000012590
LinkDB
Position
1:complement(6532939..6537812)
AA seq 250 aa
MQSSDDARNYTRLTHLVGSNLQKITKNVQEIKNLVCQLNDHGNSGDTLTKINQRQHHTKE
LLEATASHLSDVKNISPPTSASEKRQRNTMTTRLTNDLKDVSMSFQDVQRDIAKIERESV
ARMRSLSESNQETQPFIGAQGGMQMQEMATHDISVLEERERELQKLESDIVDVNIIFKDL
AKIVEDQGEMIDSIEANVEAAHERVDKGKSELGQAVKNQKKSRKKKIICGIILLVLIIIL
ILIIYFSIPK
NT seq 753 nt   +upstreamnt  +downstreamnt
atgcaaagttctgatgacgcaagaaactacacgaggctcacacaccttgtgggttcaaat
ctacagaagatcacaaaaaatgttcaagagataaagaaccttgtttgtcaactaaatgat
catggaaattctggcgacactttgactaaaatcaaccaaaggcagcatcatactaaggag
ctcctggaagcaacagcaagtcatttgtcagatgttaaaaacatttccccacccacatca
gcaagtgaaaagaggcaaagaaatacaatgacaacaagattaacaaatgacctcaaagat
gtttcaatgtcatttcaagacgtacaaagagatattgcaaagattgaaagagaatcggtt
gctaggatgcgatcattgagtgaatctaatcaagaaactcaaccattcattggagcccag
ggagggatgcaaatgcaagaaatggccacacatgacatttctgtacttgaagaacgggag
agggaacttcagaaactggagtccgacattgttgatgtgaacatcatatttaaggatctt
gctaaaatagttgaagatcaaggagaaatgattgatagcattgaggcaaatgttgaagct
gctcatgaaagagtggataagggaaaatcagaattgggtcaggccgttaaaaaccaaaaa
aagtcgcggaaaaagaaaatcatttgtggaattattcttcttgttttgataataatcctt
attttaatcatttacttttctattcctaaataa

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