Ciona intestinalis (yellow sea squirt): 100179400
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Entry
100179400 CDS
T01056
Name
(RefSeq) claudin-18
KO
K06087
claudin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03272
Virion - Hepatitis viruses
cin04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100179400
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100179400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100179400
04147 Exosome [BR:
cin04147
]
100179400
04515 Cell adhesion molecules [BR:
cin04515
]
100179400
Cilium and associated proteins [BR:
cin03037
]
Other cilia and associated proteins
Stereociliary proteins
100179400
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
100179400
Exosomal proteins of colorectal cancer cells
100179400
Cell adhesion molecules [BR:
cin04515
]
Immunoglobulin superfamily
L1 family
100179400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
L_HMGIC_fpl
Claudin_3
PQ-loop
Motif
Other DBs
NCBI-GeneID:
100179400
NCBI-ProteinID:
XP_002131091
Ensembl:
ENSCING00000020534
UniProt:
H2Y1V9
LinkDB
All DBs
Position
11:complement(6531..10690)
Genome browser
AA seq
214 aa
AA seq
DB search
MASGLHIAVCILYVIAFILEVVTVFLPYWKRNDLEDTLNDSIVRHEGLWIRCQTFATGNW
DCDDFNRFFLGLPTELQAARGFSLSSLFISFIGICLAVAATVLSVKSLQNKLTIASGGAS
MLAGLLIIAAVSWYANDIRIQHEYLTRLRLTGGSGTRYTFGYALFLGWVGGALQVVGSIM
ALCISCGNSDEEDIPPTYRYHPTKSTLAPSQEYV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcggtttgcatatagctgtgtgtatactgtatgtaatcgcattcatacttgaa
gttgtaaccgtatttctgccatactggaaacgaaacgacctggaagacactttgaacgac
tctatagttcggcacgagggactttggataagatgccaaacttttgcaacaggaaactgg
gattgcgatgatttcaacagattcttcctcggtctcccaaccgaactccaagcagcgcgt
ggattcagcttgtcttctctttttatatcatttattggaatctgccttgcagttgcggcg
actgtattaagcgtaaagagtttgcagaataagttgaccattgcatccggtggagcttct
atgcttgctggcttgttgatcattgctgcagtttcgtggtatgccaacgacatcaggatc
caacatgaatatctaacaaggttgagattaactggaggcagcggtacaagatacacgttt
ggatatgctttattccttggttgggtcggcggtgctttacaagtggtcggctcaatcatg
gctttgtgtatcagctgcggtaactcggatgaagaagatatacctcctacatatcgatac
catccaaccaaatctacattggcaccgtcacaggagtatgtgtga
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