Ciona intestinalis (yellow sea squirt): 100179427
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Entry
100179427 CDS
T01056
Name
(RefSeq) DNA polymerase eta isoform X1
KO
K03509
DNA polymerase eta [EC:
2.7.7.7
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100179427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cin03400
]
100179427
Enzymes [BR:
cin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100179427
DNA repair and recombination proteins [BR:
cin03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
100179427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
POLH-Rev1_HhH
IMS_C
IMS_HHH_1
zf_UBZ
zf-C2H2_DHX34
Motif
Other DBs
NCBI-GeneID:
100179427
NCBI-ProteinID:
XP_026696341
LinkDB
All DBs
Position
2:complement(1519399..1524516)
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AA seq
785 aa
AA seq
DB search
MFKSNLAMSSFPSNRVVVLVDMDCFYVQVEQRRDSSLKGKPCAVVQYNQWKGGGIIAVSY
EARDEGVTRNMRGDDAKAKCPEIILCKVPMANGKADLTRYRDAGAEVIQVLLQFGGVVER
ASVDEAYIDLTSVVDASMKEKRILPDLEQMGNTYVVGYPKDSCDDTTNARESGLSAYRDS
ANSDPDAERLLVAAAIVEKMRLAIYQQTSFRCSAGISHNKMLSKLSCGINKPNKQTILPF
NMVAGLFQTIKIGKIRNLGGKLGKEIMFRFGVEKIGHLTNQTKQHLVDGFGEKTGLWLYE
VCHGIDHEPVKERHVAQSVGCSKNFTGNDALGSRNKVKHWVRCLTTELVERLNKDKQMNN
RVSHALTIHIGIKKPISRTCPISRYDVDDITMRCLATLETLNTNQDKESDTWSPKITNIG
ISAKNFQSIGKSSESSCNVATMLASAKAIKPANKIPEKTKEISTKKKRNSLDTFLVSPSK
SAVQQQDPMSEENNLAKKFMFSTSSASNCGNQTESGVSKKKSFFAHLENKSGDGASCKIE
AAYLDSKQNRSTGQLTLQEAVKQNNKSSQRINGLPALSQHTYDMKKVDMNIFNSLPQFLQ
EEIRAGSKPSTSESPSKKIKLAQSQPTSGQKSITGFFGSGKPQLSSVLVQKSKPKSDQKN
LGIQTKGAENVPLGNATSVPMGYFRARTQAAAAIQDALKKQRLNTKLKPTSTHDLTTSTN
KKQNPTNSHKFFEPQKRATPKANGSLWSSFVQEETYHCDRCSTNVALTEIETHSNFHALQ
DLNAN
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaatcaaatttggctatgagttcgtttccgtcaaaccgagtcgtagtcctggtt
gacatggattgcttctacgtccaagttgaacaacgtcgggactcgagtttaaaaggaaaa
ccgtgcgccgtggtgcaatacaatcagtggaaaggaggagggattattgctgtcagttat
gaagcaagagatgagggtgtcacacggaatatgagaggagatgatgctaaagccaaatgt
cctgaaattattctgtgcaaagtacccatggcaaatgggaaagctgatttaacaaggtac
cgagatgctggtgctgaagtgattcaggttttgcttcaatttggcggagtggttgagagg
gcaagtgttgatgaggcttacattgatcttacttctgttgtggatgcaagtatgaaagag
aaaagaatactacctgatttagaacagatgggaaatacttatgtggttggatatccgaaa
gattcttgtgatgatactacaaacgcaagagaatcaggattatcggcgtatcgggacagc
gcaaactcagacccagatgcagagagattgttggttgctgcagcaattgtggaaaagatg
aggttggcaatttatcagcaaacatcttttcgttgctctgctgggatctctcataataag
atgctttcaaagctttcatgtggaataaacaaaccaaacaaacagaccattctccctttc
aacatggtggccggtctgtttcagacaatcaagattggaaaaataaggaacttgggagga
aagttggggaaagaaatcatgttcaggtttggagtggagaagataggtcatcttaccaat
cagacaaagcaacatttagttgatggatttggagaaaaaacagggttgtggttgtatgaa
gtatgtcatgggattgatcatgaacctgtgaaggaacgacatgttgcgcaatctgttgga
tgcagtaaaaatttcacaggcaatgatgctcttggatctcgtaataaagtaaagcattgg
gttcgatgcctgacgacagaacttgtcgagcgattgaacaaagacaagcaaatgaacaac
agagtttctcatgctctaacaattcatatcggaattaaaaaaccaatttcaagaacttgc
ccgatcagccgttatgatgttgatgacatcacaatgaggtgtttagcgactttggaaaca
cttaacacgaaccaggacaaagagtcagatacttggtcaccaaaaatcacaaatattggg
atttcagccaaaaattttcaatccattggtaaatcatcagaatcatcttgtaatgttgca
acaatgcttgcatctgctaaagccataaaaccagcaaataagatacctgaaaaaacgaaa
gaaatttcgacaaagaaaaaaagaaattctctcgatacatttcttgtttctccaagcaaa
tcagcggtgcaacaacaagatcctatgtctgaagaaaataatctggccaaaaagttcatg
ttctcaacaagtagtgcctcaaattgtggcaatcagaccgaatctggtgtcagtaaaaaa
aagtcattttttgcacatttggaaaacaaatcaggtgatggggcttcatgtaaaatagaa
gccgcttatttggacagcaagcaaaatagaagcactggtcagttaacgcttcaagaagct
gtaaagcaaaacaacaaatcttcgcaacgaatcaatggacttcctgctttgagtcaacac
acttatgacatgaaaaaggtggatatgaatattttcaattcattaccacagtttttacaa
gaagagattcgtgctggaagtaaaccttcaacatccgagtccccttctaaaaagataaaa
cttgcacaaagtcaacctacaagtggtcagaaatctataactggatttttcggttctggg
aaaccacaactcagcagtgttttggttcaaaaatctaaaccaaaaagtgatcaaaagaat
ttaggcatccaaactaaaggtgctgaaaatgttcctttggggaatgctacttctgtacca
atgggatatttccgagcacgtacacaagcagcagccgcaatacaagatgcattaaagaag
caaagattaaatacaaagttaaaaccaacttccacccatgaccttactacctctacgaat
aaaaaacagaacccaaccaacagccataagttctttgagccacaaaaacgtgccacacca
aaagcgaatggaagtttatggagttcatttgttcaagaagaaacttaccactgtgaccgc
tgcagcactaatgttgcattaacagaaatagaaactcattcaaactttcatgcccttcaa
gatttgaatgcaaattga
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