KEGG   Ciona intestinalis (yellow sea squirt): 100179431
Entry
100179431         CDS       T01056                                 
Name
(RefSeq) claudin-1-like isoform X3
  KO
K06087  claudin
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03272  Virion - Hepatitis viruses
cin04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    100179431
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    100179431
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cin03037]
    100179431
   04147 Exosome [BR:cin04147]
    100179431
   04515 Cell adhesion molecules [BR:cin04515]
    100179431
Cilium and associated proteins [BR:cin03037]
 Other cilia and associated proteins
  Stereociliary proteins
   100179431
Exosome [BR:cin04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   100179431
  Exosomal proteins of colorectal cancer cells
   100179431
Cell adhesion molecules [BR:cin04515]
 Immunoglobulin superfamily
  L1 family
   100179431
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 PMP1_2
Other DBs
NCBI-GeneID: 100179431
NCBI-ProteinID: XP_009859999
LinkDB
Position
10:4081591..4089286
AA seq 215 aa
MSGSISYLGLVLTLISTIGIIFTTIYREWKRNSVQASQQVLDRLYSCEGLWVRCTSPTPG
QFQCDDYDTALLGLPPALQGMRAMMCISVLFIIVAVVCSIVSLPCTAALAEKQKLYASRV
AGICAMLAGALCIASVSWYAANIVFEFWSFASINDPFKYEFGSALYVGWIAGGCALISGA
LMACCNCGNEETDSYPAYTYKPPKASGGGNNTEYV
NT seq 648 nt   +upstreamnt  +downstreamnt
atgtccggatccatctcttaccttggtttggtcctaactctcatctcaactattgggatt
atatttaccacgatttaccgtgaatggaaacgtaacagcgtacaagcttctcaacaagtt
cttgaccgtctttactcgtgtgaggggttatgggtacggtgtacctcccccacaccaggt
cagttccaatgcgatgactacgacacagcacttttaggattgccaccggcacttcaagga
atgagagcgatgatgtgcatctctgttttgttcatcatcgttgcagtcgtatgctccatc
gtctccctgccctgtaccgccgccctagcggagaaacagaagctctacgctagcagggtg
gcgggcatatgtgctatgcttgcaggcgcactctgcatcgcttctgtatcttggtatgcc
gccaacatcgtattcgagttctggagtttcgcttcaataaacgacccgtttaaatatgaa
ttcggatccgccttatatgtcggttggatcgcaggggggtgtgcacttatctccggggca
ctgatggcttgttgcaattgtggaaacgaagagactgacagttacccagcttacacctac
aagcctcctaaagcatctgggggtggcaacaacacagaatatgtgtga

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