Ciona intestinalis (yellow sea squirt): 100179431
Help
Entry
100179431 CDS
T01056
Name
(RefSeq) claudin-1-like isoform X3
KO
K06087
claudin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03272
Virion - Hepatitis viruses
cin04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100179431
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100179431
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100179431
04147 Exosome [BR:
cin04147
]
100179431
04515 Cell adhesion molecules [BR:
cin04515
]
100179431
Cilium and associated proteins [BR:
cin03037
]
Other cilia and associated proteins
Stereociliary proteins
100179431
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
100179431
Exosomal proteins of colorectal cancer cells
100179431
Cell adhesion molecules [BR:
cin04515
]
Immunoglobulin superfamily
L1 family
100179431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
PMP1_2
Motif
Other DBs
NCBI-GeneID:
100179431
NCBI-ProteinID:
XP_009859999
LinkDB
All DBs
Position
10:4081591..4089286
Genome browser
AA seq
215 aa
AA seq
DB search
MSGSISYLGLVLTLISTIGIIFTTIYREWKRNSVQASQQVLDRLYSCEGLWVRCTSPTPG
QFQCDDYDTALLGLPPALQGMRAMMCISVLFIIVAVVCSIVSLPCTAALAEKQKLYASRV
AGICAMLAGALCIASVSWYAANIVFEFWSFASINDPFKYEFGSALYVGWIAGGCALISGA
LMACCNCGNEETDSYPAYTYKPPKASGGGNNTEYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatccatctcttaccttggtttggtcctaactctcatctcaactattgggatt
atatttaccacgatttaccgtgaatggaaacgtaacagcgtacaagcttctcaacaagtt
cttgaccgtctttactcgtgtgaggggttatgggtacggtgtacctcccccacaccaggt
cagttccaatgcgatgactacgacacagcacttttaggattgccaccggcacttcaagga
atgagagcgatgatgtgcatctctgttttgttcatcatcgttgcagtcgtatgctccatc
gtctccctgccctgtaccgccgccctagcggagaaacagaagctctacgctagcagggtg
gcgggcatatgtgctatgcttgcaggcgcactctgcatcgcttctgtatcttggtatgcc
gccaacatcgtattcgagttctggagtttcgcttcaataaacgacccgtttaaatatgaa
ttcggatccgccttatatgtcggttggatcgcaggggggtgtgcacttatctccggggca
ctgatggcttgttgcaattgtggaaacgaagagactgacagttacccagcttacacctac
aagcctcctaaagcatctgggggtggcaacaacacagaatatgtgtga
DBGET
integrated database retrieval system