Ciona intestinalis (yellow sea squirt): 100179490
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Entry
100179490 CDS
T01056
Name
(RefSeq) probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial
KO
K15791
2-oxoadipate dehydrogenase E1 component [EC:1.2.4.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00310
Lysine degradation
cin00380
Tryptophan metabolism
cin00785
Lipoic acid metabolism
cin01100
Metabolic pathways
cin01210
2-Oxocarboxylic acid metabolism
Module
cin_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100179490
00380 Tryptophan metabolism
100179490
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
100179490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cin03029
]
100179490
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
100179490
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
Motif
Other DBs
NCBI-GeneID:
100179490
NCBI-ProteinID:
XP_009859736
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Position
9:complement(4936844..4949848)
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AA seq
930 aa
AA seq
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MPCPALIKSVSTMCYAKCAKHVAVFTRGYRYREDVHGYKQAANVVNNETISSTSNDPTMQ
GVERLIEQYERHGHRIGKLNPLKLPHLPELERFALLDPSLYGLELQQDISIQGETKTVET
LVGELSEKFCGNITLETDSMTSASEKQWLLDQFSLVQSEETSQDQKRRMAELMVKSQVLD
NFLATKFPTLKRYGGEGAESMLVFVEEYLRSSSLDGVEDVVIGMPHRGRNNLLVGLLNYP
VEVMIQKIKGSPEFPDEAMPIATGDVLSHLSMSTDLVFEEGKNLHVNLIPNPSHLEAENT
VAQGRCRGRQQTIKDGDYSTEDTTRGSKATCLLLHGDASFTGQGIVMEGLNMSRLPHFDI
GGTVHLIVNNQVGFTTPPNKGRSSLYTSDIGKMIGCPVIHVNGAEPEQVLRAAKLAVAYR
QKYRKEIIIDLLCFRRWGHNELDDPTMTQPLMYDVINNRHSIPDEYAGKLKENKILSENE
IESWKTEEQSRLNDSFSDNRPISEKSYLSNKSPWGKMKIPSDKKVTTWDTGCDADVLRYV
GAKSVAVPEQMKTHNRIQKSHSDSRITKLKSDGLVDWALAETLAFGSLIHQGYNIRLCGQ
DVGRGTFGHRHAMMVCQESGAVDIPLNKLSPDQNAHLELVNSLLSEEGVLGFEYGMSVEH
PDRLVIWESQFGDFFNGAQIIFDTFISSGEAKWMQQSGLVVLLPHGYDGAGPEHSSCRIE
RFLQNTNSSEDVVDSDAVNMSVCHPTTSAQYFHLLRRQMIRDFRKPLIVASPKILLRLPA
ASSPMKEFESGTHFLPVVPDSSSKSPQTVKKVIFCSGKHYFALEDQRKKLAEQNKDLNNV
AIVRIEELCPFPAEALHREVSRFTSADTFVWAQEEPRNMGPWNFVDTRFRNLLGIQLKYC
GRPVMAAPAVGINALHLQQIQKILNDPFNL
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgtccagcattaattaaaagtgtctctacgatgtgttatgcaaagtgtgcaaag
catgtcgcagtttttactcgtggttaccgttaccgggaggacgttcacggttacaaacaa
gcagcaaatgttgttaataatgaaactatatcttccacctcaaacgacccaactatgcaa
ggcgttgaaagattaattgaacaatatgaaagacatggccacagaattgggaaacttaat
cctttaaaactaccacatctgcctgaacttgaaaggtttgctttactggatccttcgctc
tatgggttggaactccagcaagacatatcaattcaaggtgaaaccaaaactgtagaaacc
ctggttggagaactgagtgagaagttctgtggaaatattacattagaaaccgacagcatg
acttctgctagtgagaagcaatggttacttgaccaattctctcttgtacaaagcgaggaa
acgtctcaagatcaaaagcgaagaatggctgagctgatggtcaaatcgcaggtgctcgac
aatttcctcgcaacaaagttcccgacattgaaaagatacgggggtgaaggtgctgagagt
atgctggtgtttgtggaggaatatttacgtagctcctcacttgatggggtggaggatgtg
gttatagggatgccacatagaggaaggaacaatctacttgttgggttgcttaattatcct
gttgaggtaatgatccaaaaaattaaaggttcccctgaattcccagatgaagcaatgccg
atagctactggtgacgtattgtcacatctgagcatgtctactgatcttgtatttgaagaa
ggaaaaaaccttcatgttaatttaattcccaatccatcacatttagaagcagagaacaca
gtagcacagggtagatgccgcggtcgtcaacaaacaattaaagatggtgattattcaaca
gaagataccacaagaggcagtaaagctacatgtcttttgttgcatggagatgcttcattt
actgggcaaggcatagtaatggagggtttaaacatgagcagattaccacactttgacatc
ggtggaaccgttcatcttatagttaacaaccaagttgggttcaccactcctccaaataag
ggaagatcttcattatatacaagtgatataggcaaaatgattggttgtcctgtgattcac
gtgaatggcgctgaaccggaacaagttttaagagctgccaaactcgctgttgcatatcga
caaaaatacagaaaggaaataataatcgacctcctttgtttccgacgatggggtcataat
gagcttgatgatccaacaatgacacaaccactcatgtatgatgtcataaacaaccgacac
tcaatcccagacgaatatgccgggaaactaaaagaaaacaagattttgtctgaaaatgaa
atagaaagttggaaaactgaggagcagtcacgcttaaatgattcattcagcgacaataga
ccaatcagtgagaagagttatctttcaaataaatcaccttgggggaaaatgaaaatacca
agcgacaagaaagttacaacatgggatactggttgtgatgctgacgtgctgagatatgtg
ggtgcaaagtctgttgctgtgcctgaacaaatgaaaactcacaacagaattcagaaatct
cactccgattctcgaatcactaagttaaaatctgatggtttggttgactgggcgctggct
gagactttagcgtttggttcgttgatccaccaaggttacaacatcaggttgtgtggacag
gatgtgggtcgtgggaccttcggccaccgtcatgccatgatggtttgccaggagagcggt
gcagttgatatcccactgaataaactatcaccagaccaaaacgcacaccttgagctggtg
aactccttgttatcagaagaaggagtccttgggtttgaatacgggatgagcgttgaacat
ccggaccgactcgtgatatgggaatcacagtttggagatttcttcaacggggcacagatt
attttcgatactttcatctcatccggagaagctaaatggatgcagcaaagtggtctagtt
gtcttgttacctcatggttatgatggagcaggtccggaacattcctcttgcagaattgaa
cggtttttacaaaacaccaacagctcagaggatgttgtagacagtgatgcagtaaacatg
tcagtatgccaccccaccacctctgcacaatacttccaccttctcagaagacaaatgatc
cgagatttcaggaaaccccttattgtggcttcgcccaaaatactcctaagattaccggcc
gcttcttccccaatgaaagagtttgaatcaggaacccactttctccctgtggttccagac
agcagttcaaagtccccacaaacggtgaagaaagtgattttctgttctgggaaacattat
tttgccttggaggaccaacggaaaaaattggctgaacaaaacaaagatcttaacaatgta
gcaatcgttcgtattgaagaactttgtccttttcctgcggaagcgctgcatcgtgaggtt
tctagatttacttcagccgatacatttgtttgggcacaggaggaaccacggaatatgggg
ccgtggaactttgtggatacaagattccgtaatttacttggaatacagttaaaatattgt
ggacgtcccgtcatggcagctccagctgttgggatcaatgctttacacttacaacaaata
cagaagattttgaatgacccatttaatttataa
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