Ciona intestinalis (yellow sea squirt): 100179493
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Entry
100179493 CDS
T01056
Name
(RefSeq) DENN domain-containing protein 1A
KO
K20161
DENN domain-containing protein 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100179493
Membrane trafficking [BR:
cin04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100179493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
SPA
Motif
Other DBs
NCBI-GeneID:
100179493
NCBI-ProteinID:
XP_026694742
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All DBs
Position
1:2748473..2759730
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AA seq
490 aa
AA seq
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MAKEKHITETSLGSRLRDDATKIFDCFLIVERNAEENGPATELIFPSEFQDKEIIQQSLL
FCFPFDRSANESPLKKNSNHYTFILTDIEGKHRFGFCKLTNNATKCYCLLSFMPWFEIFY
KMLNFVCELRTQNQHDALMTMIQNLYNEPVPSSLQTFRINETLVFTAPDMTALSSIPENR
NLSEYYSNVNTGFMMDMFTSLMFERRVIFTSTNLSTLTSCVHGAEALLRPLHWQHIFIPV
MPAHLVDYCLAPMPYLVGVHSSLMPKVRDMIAMDCDIIVADIDKEEIESVHEDMERMPSD
VMSFLKSLLRKPTVMVGTNLSMAFLRAQARLIGGYRDGLKFRPGEAIVFDEDAFIESYKT
SSGREYARMLVQLQTFKQFVDGRLDMLNAGIGFRDVFENEVNIVDAAKGNSSETYKEWVN
AAKKGGNELFMQFKRKAKGNMKAFQNALKQPDKTIISPTKEQKTLEEAPKRIRPSRPARL
PHQTHLRWKN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaaagcatatcactgaaacttcacttggatcacgacttagagatgacgcc
acaaagatatttgattgcttcttaatcgttgaacgaaatgctgaagaaaatggccctgca
actgaacttatttttcctagtgaatttcaagataaagaaataattcaacagtctttgtta
ttttgctttccttttgaccgatcagccaatgaaagtccgcttaaaaagaactcgaaccat
tacacctttatcctcactgacatagaaggaaaacatagattcggtttttgtaaactcacc
aacaatgctacaaagtgctactgcttattgagctttatgccatggtttgaaatcttctat
aaaatgttgaattttgtatgtgagttacggacacaaaatcaacatgatgctctcatgact
atgatacagaacctttataatgaaccagttccttcttcattgcaaaccttcagaataaat
gaaactttggttttcacagctcctgacatgacagctttatcttcaatcccagaaaaccga
aacctttcggaatactattcaaatgttaacactggttttatgatggatatgttcaccagt
ttaatgtttgaacgaagagttatatttacttcaaccaatctaagcactctgacatcttgt
gtacatggtgcagaagctctgttacgtcccctacactggcaacatatatttatccctgtt
atgccggcccatctggttgactattgcctagccccaatgccatatttggtcggtgtccac
tcttctttgatgcccaaggtccgagatatgatagcgatggattgtgacatcatagtggcg
gatatagacaaggaagaaatcgaaagcgttcacgaggatatggaacgcatgcctagtgat
gtaatgtcgtttttaaaatcgttgctaagaaaaccaacagtgatggtcggcaccaaccta
tcgatggcgtttctgcgggcacaagcgagacttattggagggtatcgtgatggtttaaag
tttcgacctggtgaagcaattgtgtttgacgaggatgcattcatagagtcgtacaaaacc
tcttctggtcgtgagtacgcacgtatgctggtccaacttcaaactttcaagcagtttgtg
gatggtagacttgatatgctgaatgcgggcattggttttcgggacgtgtttgaaaacgaa
gtcaatattgtggatgctgcaaaaggaaacagcagtgaaacttacaaggaatgggttaat
gcagcaaagaaaggaggaaatgagctttttatgcagtttaagcgcaaagctaaagggaac
atgaaagcttttcaaaatgctcttaaacaacctgacaaaacaataataagcccaaccaaa
gaacaaaaaactctggaagaagcacccaaaaggatacgaccgtcgagacctgctcgactc
ccccaccagacccatctaaggtggaagaattaa
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