Ciona intestinalis (yellow sea squirt): 100179495 Help Entry 100179495         CDS       T01056                                  Name (RefSeq) helicase SWR1 isoform X1   KO K11661   helicase SRCAP/SWR1 [EC:5.6.2.-] Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     100179495  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:cin03036]     100179495 Chromosome and associated proteins [BR:cin03036]  Eukaryotic type   Chromatin remodeling factors    SRCAP complex     100179495    SWR1 complex     100179495 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom Helicase_C HSA Myb_DNA-bind_6 Myb_DNA-binding Myb_DNA-bind_4 Motif Other DBs NCBI-GeneID:  100179495 NCBI-ProteinID:  XP_009858051 LinkDB All DBs Position 3:4450832..4480680 Genome browser AA seq 2660 aa AA seqDB search MVLNNHNDGTPATDASNSPVAEKRLGAIAIQEEKMKLCSENYTELVTELFFLQHGGNYTE FAQFKKRPSQKLIDHLRQTPVFPNGDGRHKSSDARKASTDNDKLNTNKPETKQPTVLSVE TTPAASLSGNRPAYSPSRAPANQGSVQSSPKLNDPTLPASPSLTQRLKRQSRNTLSDVYE DTIGSQEEILERAKQEAVVQRRVAELRKQGLWSQRRLPKVQEPPRNKTHWDYLLEEMRWL AADFAQERKWKRAAARKVVRMVTAYHKDVREKEKRVEREGQQKLRRIAANMARQIRNFWS NIEKVVEYKQRSLLDEKRQKALDLHLNFIVDQTAKYSDWLSQGLNQPSVEASPSVSKSGS QAGSDDDFLPQGASSDDEETIAVEEKDVKEEHVLDEIALLQKESEIPFEDLLSQLPPDIV QNVGAPLIDASKDEDLPETKKEGEQIIEETLKEESPKPPEATEESKPSPEKEDPTPQNEE ALSSDDESNKPTPISLRRSARKRQGDQDTEDEDAKRRKTEDNQDVEFDGEDESSSDDERT LKEQEQTEDVDHDKEIADLQAENELPIEELMKMYQGYGEGGEEDAEDEPVEEKETVEPEP EPDAKEGSDLGESSDEEAGENDNDEEEETHEEIGMDYLLKADLGNKEKEKDGEADASKVE SSPNKEITDVAAEAMSLQPTGHTLATTQVVTPVPGLLKHTLREYQHIGLDWLVTMYVKRL NGILADEMGLGKTIQTIALLAHLACDKGVWGPHLIVVPTSVMLNWEMEFKKWCPGFKILT YYGSQKERKLKRTGWTKSNAFHVCITSYKLVLQDHTSFRRKKWRYLILDEAQNIKNFKSQ RWQTLLNFNSQRRLLLTGTPLQNNLMELWSLMHFLMPHVFQSHREFKEWFSNPMTGMIEG SQEFNEKIVRRLHKVLRPFLLRRIKKDVEKQMPNKYEHVVRCHLSKRQRFLYDDFMSRAS TRETLAGGHFMSVINVLMQLRKVCNHPNLFESRPTVSSFVTTPMTVCCPTIVAKAMEKSV FETADLEYLNLYLPNLCKVASYNVEERYALKTPKKLIEELDSTEEKKIEPLSHPANLNDR IRSMVFERLFTSPHPLQQQKNASLLATRPASRSGSPTLLQQKLTSATNVTTTKSVGKSDT TDITTSKSSTSQSITLQYQTAQGTRWATIPNGQIRHLPGGVVQIVTTGVPSRSATPVPTQ AALPATDRASDTTATVERDASGSKRLPAESYSKMLARIKASKRTETLSRIARMNEQRCYA NPSYLPANTIDLLSSITKPRHATNANMAYYFWREYYPTPDISTPTHTKQKSFIESDLLQQ LVKLPSSRLLEMQDVLNRFTFVVPKVTSPSTKFVAAHQTPWKYYSITTSMSTLRQWLSRK LVPYHRILRNTRVQFPEVRLIEYDCGKLQVLNVLLRRFWVEKHRILIFTQMTRVLDILEA FLSYHGYRYLRLDGSTPIEQRMARMERFNNDPRIFCFILSTRSGGIGVNLTGADTVVFYD SDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRLLGEMAIEGGSFT TAFFKEQALKDLFNAPSGLEDLNEQPTTPRPLTARQKAIEASKTEGGESEKEKDNLEVAL LETEDKEDAAAAKMLKEEQDAVLEEFTEEKVEEEDDGISERFKIPKGSRVEEELKTIYDE LNPIERYALRFLELSAEELNDLELQEAESQVEQSKKDWELSHLMALKEEEEMRMDEEDEI FYTREDSEAQTYIDQLTGEIMPLWLPPTPPHDDTDIYQDETMCLLYLPVPMMEEQLPPVM KRDRKRIKMETGMQSPRKKLSRIDINIPKSLFNRPHVNLKKKEPKMKIKLAHKTKASMLS ATPSKGNIPGLSTALSVSPKENGELGKGGVEMGLDWIINEDWALLQAVQQVLDMSPSLAV MMPAHTANWHLVAEMVNAVGCVYRSPKQCKYRYENVISMREDGKGLTTDAATPKKKMKVV KPLKTKPMKMQKTNYLYIADTNLQFSTLYSNRFDACKVICNKRNPQQKSTAGTGQFQRNP KHTTILQDCGIAYDKPLLPMQVAAARAKRIASQKKPTSELLATTASQPQSVQSVQPTVSI TPQVGHTVIVTNGNQLVAKQPMVPGLSQLTAIPLSGGGSNIVVNNSAFTRRVNQSQAAAI SLQSQGTKMATGKTSVPSLTLRTLTGAQQLQIQPQGSNAQMSLNFTGGGQSPMVTITTAV AGTSTPSIRPSVTYPSRAGTQVQKLTTMQQIRQANKQQTVTPTKHHVKQLRVTQQQPQQQ QHGGVSASVTKPLLGKTVQLTKQVTPQELMLMKRRTQLKVQPQIQIAPINAQIQAQQVQS LAAQQATQSIITTKPLPITVPVTNLVSGVNLSSLNTTSSSQQKPMIVTGGQTTLNQQHLI FQQHLLKQRQIPQQQARQVIASKQPKAVYAQQLVSGTQGGTTVKMQAQVLNQLMQQQQKQ RRSSNKQQQQPVTLTVTKLLQSQSPVGTTLRHTLVPQSSQMNAQQITQLPISVSTAIVTS GAGNQQQRVISQPRQPQQLPRVRQIHQMTSQPGSTPQMIVASTPIAMQRPPTVVTVSNQQ TMQLQNQLLSQQVHVRNPTQTVLSPTSINLQVIPSSHPTTPQAQSHEGSPATQVVTLSTT GSQETPGQEIQYTLQQNVPR NT seq 7983 nt NT seq  +upstreamnt  +downstreamnt atggttttgaacaaccacaatgacggtacacctgctactgatgcctcaaattcgccagtt gccgaaaagcgacttggtgcaattgcaatccaggaggaaaaaatgaaactctgcagtgag aattacaccgaactcgtcacagagttattttttctacagcatgggggcaactatacagag ttcgctcaatttaaaaagcggccgtcacaaaaattgatcgaccatttacggcaaacccca gtgtttcccaatggggatggtcgacacaaatccagtgatgcacggaaagcatctactgac aatgataaattaaacaccaacaaaccagaaacaaagcagccaaccgttttatccgttgaa accacaccagccgcaagtttgagtggaaaccgtcccgcttactctcccagcagggctcca gcaaaccaaggatctgtgcaaagttcacccaaattaaatgaccccacgcttcctgcttca ccatcacttacacaaaggttaaaacgacagtcccgaaacacattatccgatgtatatgaa gacactatcgggtcgcaagaggaaattttggagcgagcaaagcaggaggctgtcgtacag cgtcgggtggctgaactccgtaaacaaggtttatggtcccaacggcgactgcccaaggtc caggaacctccaaggaacaaaacacactgggactacttgctggaagagatgaggtggttg gctgctgattttgcacaggagaggaaatggaaaagagcagcagctagaaaggttgttcgt atggtcactgcttatcataaagatgtaagagaaaaggagaagagagttgaacgggagggc cagcagaaattgaggagaattgctgcaaacatggcaagacaaataaggaatttctggtct aacattgaaaaggttgttgaatacaaacaacgaagtctgttggacgagaaacgacagaaa gccctcgaccttcatctgaactttattgtcgatcaaacagctaaatactcggactggctt tcacaaggattgaaccaaccatcagttgaagctagcccttctgtttcgaaatccggctcc caggctggaagtgatgacgacttccttccacaaggagcatcaagtgatgatgaagagacc atcgctgtggaagagaaagatgtcaaagaagagcatgtgttggatgaaattgccttgctg cagaaagaaagcgagatcccattcgaggacctactatcccaacttcctcctgatattgtg cagaatgttggagcccctcttatagatgctagtaaggatgaggacctgccagagaccaag aaagaaggggagcaaataattgaagaaactctaaaagaagagagccccaaaccaccagaa gctactgaagaaagcaaaccttcacctgaaaaagaagatcctacccctcaaaatgaggag gctttatcatctgatgatgaatcaaacaaaccaactccaatctcattacgaagatcagcg agaaagaggcagggagatcaggacacagaggatgaagatgctaaaagaagaaaaactgaa gacaaccaggacgttgagtttgatggagaagatgaatcttcctcggatgatgagaggaca ttgaaggaacaagaacaaactgaggatgttgatcatgataaagagattgctgatcttcag gcagaaaatgagcttcctattgaagagttaatgaagatgtaccaaggatatggggaaggt ggtgaagaagatgcagaagatgaaccagtggaggaaaaggagacagtggaaccggaaccg gaaccagatgcaaaagaaggatccgacttaggcgaaagcagtgatgaagaagctggtgag aatgataatgatgaggaggaagagacgcatgaggagattgggatggattatcttcttaaa gcggatcttggtaacaaagagaaagagaaggatggtgaagcagacgcatctaaagttgaa tcaagtcccaacaaagaaatcactgatgttgctgctgaagccatgagtttgcaacctacc ggccacaccttggccacaacacaggtggtaactccagttccaggtttactcaaacatacc ctccgtgagtaccagcatattgggttagattggttggttaccatgtatgtgaaacgtctc aatggaatccttgctgatgagatggggttgggtaaaaccattcaaacaattgctttgctg gctcatctggcttgtgataaaggtgtttggggtcctcacttaatagttgttccaaccagt gtgatgcttaactgggagatggaattcaaaaagtggtgtcccggttttaagatcctaaca tattacggctcacagaaagagagaaagttgaaacgaacaggatggacgaaaagtaacgcc ttccatgtttgcatcacttcatataaacttgttcttcaagatcatacaagttttagacgg aagaagtggaggtacttgatcttagatgaggctcagaatataaagaacttcaagtcacag agatggcaaacacttcttaacttcaactctcaacgccgtctcttacttactggtacccca cttcaaaataacttgatggagttgtggtcccttatgcattttttgatgccgcatgtgttt cagtcacatagggagttcaaggaatggttttcaaacccaatgaccggtatgattgaaggt tcccaagaattcaatgaaaaaattgttcgacgtcttcataaggtcctgcgtccattcctg cttcgaagaatcaaaaaagatgttgaaaagcaaatgccaaataaatacgagcatgttgtt agatgccatctgtctaagcgacaaaggtttctttatgacgactttatgtcccgagcatca accagggaaacattagctggtggtcacttcatgagtgtgattaacgtacttatgcagtta aggaaggtttgcaatcatccaaacttatttgaatcgcgaccaactgtttcttccttcgtt accactcctatgaccgtgtgctgccccaccatcgtagccaaagcaatggaaaaatctgtt tttgagacagctgatcttgaatatttgaacctctaccttccaaacctatgtaaagttgct tcatataatgttgaggaaagatatgcgctcaaaactccaaagaagttaatagaagaattg gattcgactgaggaaaagaaaatcgagcccttatcccaccctgctaatttaaatgatcgg atacgctcaatggtgttcgaacgcctctttacaagtccccaccctttacaacagcagaaa aatgcgagtttgcttgccacgcgaccagcaagcaggtctggctcaccgacattgcttcaa cagaagctgaccagtgctaccaatgtgaccacaacaaagtccgtgggcaaatctgatacc acagacatcaccacaagtaaaagcagtacctcacaatccataacactacaataccaaact gcacaaggaacacgatgggccacaatacctaatgggcagatacgtcatttaccaggtggt gtggtgcaaatagtaaccacaggtgtaccatcacgcagtgcaactccagtaccaacacaa gctgcattacccgcaactgatcgtgcaagcgacactacagcaactgtggagcgtgatgcc tcaggttcaaagaggttgccagcagaatcttactcgaaaatgttggcacgtataaaagct tcaaagcgaacggaaactctttcaaggatagcacgcatgaatgaacagcgttgctatgcc aacccatcttatcttccagcgaacacaattgatctgctttcatctatcacaaagccaaga catgctacaaatgcaaacatggcatattacttctggagggaatattaccccacccctgat atatccacaccaactcataccaagcagaaatcatttattgaaagtgatttgttgcaacag ttggtcaaactaccatccagcaggttacttgagatgcaggatgtattaaacagattcaca ttcgttgtcccaaaagtaacttccccttccacaaagttcgtggccgcccaccaaactcca tggaaatattattccatcaccacttccatgagcaccctacgtcaatggttgtcacggaaa cttgtcccctaccacaggatattgcgcaacaccagggttcagttccctgaggttcgactc atcgaatatgactgtggtaagcttcaagtattgaacgtcctcctgcgaaggttttgggtt gaaaagcatcggatcctcatttttactcaaatgacgagggtcctcgacatactagaggct ttcctcagttaccatggttaccgatacttaagattggatggatcaactcccattgaacag agaatggccagaatggagaggttcaacaatgatcctcgcatcttctgcttcatcctctcc accaggagcggaggtatcggggtcaacctcactggggccgacaccgtcgtgttttacgac agtgattggaaccccaccatggatgcacaggcacaagacaggtgtcatcgtattggtcaa acacgcgatgtgcatatctaccgactgataagtgagagaaccgtggaagagaatatactg aagaaggcaaaccagaagaggttgcttggagagatggcaattgaagggggaagctttacc actgctttcttcaaagagcaagcattgaaagatttattcaatgctccatctggtttggaa gacctgaatgaacaaccaaccacaccaaggccgcttactgctcggcaaaaagcaattgaa gcatccaaaacagagggtggtgaaagtgaaaaagagaaggataatcttgaagttgctctt ttggagacggaggacaaagaagacgcagcagcagcgaagatgcttaaagaggagcaggat gctgttctggaggaattcacagaagagaaggtggaagaagaagatgatggaataagtgaa agattcaagatcccgaaaggatctcgtgttgaagaagagctgaagacgatctatgatgag ttgaatcccattgagcgatatgctcttcgattcctggagctctcagcggaggaacttaat gatcttgaactccaagaagcagagagccaagtggagcagtcaaagaaagattgggagctg agtcacttgatggctctgaaggaagaggaggaaatgaggatggatgaggaagatgagatc ttctacacacgagaggactccgaggctcagacttacatcgaccaattaactggagagatt atgccgctatggttaccacccacccctccacatgatgacacggacatctaccaagatgaa acgatgtgtctgctttatcttcctgtaccaatgatggaggaacaacttcctccagtgatg aaacgggatcggaaacgaattaagatggaaactggcatgcaaagcccacggaagaaatta tcacgaatcgacatcaacattccaaagtctttgttcaatcgtccgcatgttaatttgaag aaaaaagaaccgaaaatgaaaattaaacttgctcataaaacaaaagcaagcatgctatct gctactccatctaaaggaaacataccaggcttaagcacagcattgtcagtgtcaccaaaa gagaatggtgagcttggtaaaggtggagtggaaatgggtttggattggattataaatgaa gactgggcattgctacaggcagtacaacaagtattagacatgtcaccatctcttgctgta atgatgcctgcacatactgctaactggcatcttgttgctgagatggttaatgcagttggt tgtgtgtatcgctcccctaaacaatgcaaatatcggtacgaaaatgtgatttctatgaga gaggacggtaaagggctcactactgatgctgctacaccaaagaaaaaaatgaaagtggtg aagccattgaagaccaaaccaatgaagatgcaaaagacgaattatctttacatcgctgac actaatctacaattctccactctctattctaacaggtttgatgcttgcaaagtaatttgc aacaagcgtaacccacaacagaagagcacggcaggtacaggacagtttcaaaggaatcca aaacacacaaccatcttacaggactgtgggatcgcttacgacaaaccactattgcctatg caggtggcagcagcgcgtgccaagcgaatcgcgtcacaaaagaaaccgacctctgagtta ctcgccaccactgccagccaaccacaatctgtacaaagtgttcaaccaaccgtgtcaatc acaccacaagttggtcatactgtcattgtaaccaacggcaaccaacttgttgctaagcaa cccatggtccctggtttgagtcaattgacagccatcccattatcaggtggtggaagcaac atagtggtcaacaactctgcttttacacgtcgtgtcaaccaatcacaagctgctgctata agtctacagtcgcagggaacaaagatggctactggcaagacctccgtgccctccctcacc ctgcgtacactgactggtgcgcaacaactacaaatccaaccacaaggatccaatgcacag atgtcgctcaacttcacaggtggtggtcaatcacccatggtaaccataacgacagcagtg gctggtacaagcacaccttctataagaccttccgttacttaccccagcagagcgggcaca caggttcaaaagttgaccaccatgcagcagatacgacaagccaacaaacagcaaactgtt actccaacaaaacaccatgtgaagcagcttcgggtaactcaacaacaacctcaacaacaa cagcatggtggagtgtcagcttctgtaaccaagccgttattaggaaaaactgtgcagctg acaaaacaagtcacgccacaagagttgatgctcatgaaacgacgcacacaattgaaagtg cagccacagatccagatcgcacccatcaatgcacagatacaagcacaacaagtacaatcg ttagctgcccaacaagccacacaatccatcatcacgaccaaaccacttcctatcactgtt cctgtcaccaaccttgtatcgggtgtcaacttgagcagtttaaacaccacaagttcatct caacagaaacccatgatagtaactggtggacagaccacactgaaccaacaacatcttata ttccaacaacatctgctcaaacaacgacaaattcctcaacaacaagcacgacaggtgatt gcatcgaagcaaccgaaagcagtatacgcacaacagttagttagcggcacacaaggaggt acaacagtaaagatgcaagctcaagtcctcaaccaactaatgcagcaacaacagaagcaa agaagaagttctaacaaacaacaacaacagcctgtcaccctaactgtcactaaacttcta caaagtcaaagtcccgttggtacaacgcttcgccacacgctggtgcctcagagctcacag atgaacgcacaacaaatcacacagctaccaatatctgtatcaaccgccattgtaactagt ggtgcaggtaaccaacaacaaagagttatttcccaaccaaggcaaccacaacagttacca agggttcgacagatacaccagatgaccagccaaccaggttccacaccacagatgatcgtt gcatccacaccaattgccatgcaacgtccaccaactgtggttacagtaagcaaccaacaa acgatgcaactgcaaaatcaacttctatcccaacaagttcacgtacgaaacccaacacaa actgttctctcccccacttcaatcaacctgcaggtgatcccttcttcccaccctaccaca ccacaagcccagtcgcatgaaggttccccagccacacaagttgtcaccttatctaccact ggtagtcaagaaactccaggccaggaaattcagtacacactgcaacagaatgtaccgaga tag

DBGET integrated database retrieval system