Ciona intestinalis (yellow sea squirt): 100179501
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Entry
100179501 CDS
T01056
Name
(RefSeq) rho GTPase-activating protein 7 isoform X3
KO
K20632
deleted in liver cancer protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100179501
Membrane trafficking [BR:
cin04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
100179501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
START
Motif
Other DBs
NCBI-GeneID:
100179501
NCBI-ProteinID:
XP_018673119
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All DBs
Position
2:1932060..1976646
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AA seq
1246 aa
AA seq
DB search
MHDSSSEDAAATRHLRSVIRSRSLDRNQPAATVKLHRPTLQAPVSFICCNPARAVMATDN
VIKAPMITITHDPTCIRIADGIGPRYEHLTSPSSYSRSSSSASILSKHSHLTEDSEPSAC
SSRSSSVPSSPASSPRLPHSSKTRFRTQREKETKFAERQAADACNWLRAAGFPQYAHFYE
AGLFPVDIASVSGDHDFLGQEHIAALVRRLNVLNKCASMRLDKAVAKESQTDEDDDDDDD
ECAISEFWHFEGGEHRWSRLDSKSSNITSPNGRMLSSGSAHLPHLDETLEDMPGDVFTNA
LVRPAAIEIERHRQHYSQSEPKQATKNKSSNSFLKRVGDLKKLRPGSFRRKDILQRTNSS
DAAIELGESRTKPRHTTDIRSKLGRKNRRLVIGEPTLQSGHEKINSMRCVPIEVSPPTGA
PRGRKNSSQSLISSSSSASGSASSSSTPASRMRGFAEDRTTRSDPGELNSTSPRLLEHNR
VTLELNAAKTRNPTPPIREPLFVMPKGYKPGTFPSGLVEMTDEEPPTSPSSGFVSNSSSS
RSRSTSDSFHASQASEPTGRLVRPMSIYDNLPDTVLTSGASAQDFLDIMDPSTLVGAMPV
NDSGVFDGSQESLDAPGVLDSAFWSVDQIVEQTQSLQQMVQQMEEIHDDTVEPTTVNSLE
SLPCQFNSAMETLPSYSSENVSVTEDESEALSTSDQLPLSRQPRLRWSSFNLDHTASTSS
ESLQIHNLSVGQLMILRKLSVLKLTALMESYASNNNKGSLNWSVPRFIRRIKVPDYKDRA
VFGVPLLHNVQRFGQPLPQCIQRALAYLRRTALDQVGLFRKPGVRSRIQKLRASCENNPE
LSSFDDCTAFDVADMVKQYFRELPDPLMTMKLSDTYVGIFLYVPEELRLQTLQAATMLLP
DETRETLKTLLCFLSDVASRSSENHMNETNLATCFAPSLFHQQYGSLKTMTSASPKIRKQ
QKVPGASLGRPDIKEMNENMAANQCLAFMICQVKNLFRIPEDAMTQCRMSVMQQAEDVLA
SEIGYSASDLVVEGDNHADYHSYVDRTVLQTMREEQRISQNKGGWQNVPSSAGSDLSCKK
MHDGNPLRLWRCQVEVSGATEEQLLERILHERHVWDDDLIQWKVLKRPDERTQLFQTARA
EMSPHPTRDYCVLRSWRRNVNSRGASVIVETSTSNPSMLGDVRGVILASRYVIEPTDDPL
TCQLTHVCRVDTKGRNPEWYNKAYGHVVVQQLLRIRDSVRVMPPKT
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgcatgactcgtcgtccgaggatgctgcagcaactcgtcacctccgttcagtgatacgt
tcacggtcattggaccgtaatcagccggcagccacggtaaagcttcaccgacctactcta
caagcaccggtatccttcatctgctgtaacccagctcgtgccgtaatggccacggacaac
gtgataaaagcaccgatgattaccataactcatgacccaacgtgcattcgtattgctgac
ggcattgggccgcgttacgaacacctgacgtcaccatcatcctacagcagatcatcttct
tccgcatctatcttaagcaagcactcgcacctcaccgaggattcggagccatcagcctgc
agctcaagaagttcctctgtcccatcttcccccgcatcctcacccagacttcctcattca
agcaaaactcgattcagaacgcaacgagaaaaagaaacgaaatttgctgagagacaagct
gcagacgcatgcaactggctgagagctgctggatttccccaatacgcgcatttctacgaa
gcggggctatttcctgtcgacattgccagcgtcagcggggaccacgatttcctcggccag
gaacatatcgcagctcttgtgaggcgactcaatgtgctcaacaaatgtgcaagtatgaga
ttggataaagcggtggctaaggaaagccagactgatgaagacgacgacgatgacgacgac
gaatgcgccatcagtgagttctggcacttcgagggcggtgaacacaggtggtcgaggttg
gatagcaagtcatctaacatcaccagtcccaacggtcgaatgttatcttctggttccgcc
cacctaccccatcttgacgaaacgcttgaggacatgcccggagacgtgttcaccaacgct
ctggttcggccagccgcgattgagatcgagcgacatagacagcattacagccagtccgaa
cccaaacaagcaacaaaaaacaaaagttccaacagtttcctaaaacgagtcggtgacctg
aagaaactgaggccaggttcctttcgccgaaaggacattcttcagcgaaccaattcgtct
gacgcagcaatcgaacttggggaatcaagaacaaaaccccgccacactaccgacattcga
tccaaacttggccgaaagaaccgtcgtcttgttattggcgaaccgaccctacagagcggt
cacgaaaaaattaacagcatgcgatgcgtgcctattgaagtttctccccccactggggct
cccagaggaagaaagaattcgtctcaatctttaatcagttcctcttcctccgcaagtgga
agtgcaagttcgtcatctactcccgcatcccggatgcgaggatttgcagaggaccgaacc
acgcgttccgatcccggtgaacttaactcgacatctccccgccttctagagcataatcgt
gtaactctggagcttaacgcggcgaagacacgaaacccaacaccaccaattcgtgaaccc
ctcttcgtaatgccgaaaggttacaaacctggtacattcccctccggtttggttgaaatg
acggacgaagagcctccaacctcaccgtcctccggtttcgtttccaactcctcttcatca
cggagcagatcaacctccgactccttccacgcttcccaagcttcggagccaaccggaaga
ttggtacgaccgatgagcatctacgacaaccttcccgacactgttttaacaagtggcgct
tccgcccaagatttcctcgatattatggaccccagtacactggtcggtgcaatgccagtg
aatgactctggtgtttttgacggcagtcaggagtcattagatgctcccggtgtgttggac
tctgcattctggagcgttgatcagatcgtcgagcaaactcagtcattgcagcaaatggtt
caacaaatggaagaaatccatgatgacacagtagagccgacaacggtcaactcccttgag
agtttaccttgtcagtttaacagtgccatggaaactctgccatcctatagctccgagaac
gtatctgtcaccgaggatgaatccgaagcactctccacatccgaccaactgcccctctcc
agacaaccccgtctacgatggtcgagctttaatctcgaccacacagccagcacgagctcg
gagagtctgcagattcacaatctatctgtcggtcaactcatgatccttcgaaagctgtcg
gtcctcaagctgacagcgctcatggaaagttacgcatcaaacaacaacaaaggctcgctc
aactggtcggtccctcggttcattcgccgcatcaaagtaccagactacaaagacagggcg
gtgttcggcgttccgcttcttcataacgtgcaacgcttcggccaaccattacctcagtgc
atacagcgcgcccttgcatacctccggcgaacagcacttgatcaagtgggcctcttccgc
aagcctggagtccggtctcgcatccagaagcttcgtgcgagttgcgagaacaaccccgaa
ttgagcagttttgacgactgcacagcttttgacgttgctgatatggttaagcaatatttc
cgtgagcttcctgacccactgatgacgatgaaactttccgacacatacgttggaattttc
ctatatgtccctgaagagctccgcctccaaacgcttcaagcagcaactatgcttcttcct
gacgaaacccgtgagacactgaaaacgcttctatgctttctcagtgacgtcgcatctcgt
tcaagtgaaaatcacatgaacgaaaccaaccttgcaacttgcttcgccccttccctcttt
caccaacaatacggaagcttaaagactatgacatctgcatcgccaaaaatacgaaaacaa
cagaaagtccccggtgcatcactcggtagacctgatattaaggaaatgaatgagaacatg
gccgccaaccaatgtttagcctttatgatctgccaagtgaaaaacctcttccggatccca
gaagatgcgatgacgcagtgtcgaatgtcagtgatgcagcaggcggaagacgttctcgca
tccgagatcggatactctgcctccgatttagttgtcgagggcgataaccacgcggattat
cattcatacgttgaccgtacggtgctccaaactatgagggaagagcaaagaatctcacaa
aataaaggaggttggcagaatgtgcccagctcagcaggaagcgatctatcttgcaaaaag
atgcatgatggaaacccgttgcgactgtggcgatgtcaggttgaggtatctggtgcgacg
gaggagcaattactagagcgtatcctccacgagaggcatgtttgggacgacgaccttata
cagtggaaagtcctcaagcgtccggatgaaagaactcaactcttccaaaccgcaagagca
gaaatgagtcctcacccaacgagggattactgcgttttaagatcatggcgaagaaatgtg
aactcccgcggtgcttcggtcatcgttgaaacatcaaccagcaatccatcgatgcttggt
gatgtacgcggtgtcattcttgcctctcggtacgtcatcgagcccacagacgatcctctc
acatgtcagttgacgcacgtctgtcgggtggacaccaaaggccgtaacccggagtggtac
aataaagcgtacggccacgtcgtggtccaacagcttctacgaatccgtgattctgttcga
gttatgcctcctaagacatga
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