Ciona intestinalis (yellow sea squirt): 100179525 Help Entry 100179525         CDS       T01056                                  Name (RefSeq) DNA polymerase theta   KO K02349   DNA polymerase theta [EC:2.7.7.7] Organism cin  Ciona intestinalis (yellow sea squirt) Brite KEGG Orthology (KO) [BR:cin00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cin03400]     100179525 Enzymes [BR:cin01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      100179525 DNA repair and recombination proteins [BR:cin03400]  Eukaryotic type   Other factors with a suspected DNA repair function    DNA polymerases     100179525 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  POLQ_helical DEAD HTH_61 Helicase_C ResIII Helicase_dom4_arc Motif Other DBs NCBI-GeneID:  100179525 NCBI-ProteinID:  XP_018672878 LinkDB All DBs Position 1:2350389..2365833 Genome browser AA seq 1334 aa AA seqDB search MANQKLQDWGLPECIRNNYTAVGLTDMFAWQAECLSLPGVLDGKNLIVSAPTSAGKTLIV EILMAKRVYGTGKKALLVFPFVSLAREKMFHLRNIFDGTGLNVDGYMGGMSPPGGFSSVD IAVCTIEKANSILNKLIEEKSTEQLGMVVVDELHMVGDDGRGYLLELLLTKIRYLKTKEI SIKTPPCQIIGLSATVTNLGLFATWLDGLVYETKFRPVPLSRYVKIGKEIFDEKLIKCRD FQPQVTFNEDDDDITALCYETICNNHSVLLFCPTKKWCENLANLIARNFQQINGTKIATA GRAGILEQLRRSPAGLDPLLHATIPIGVAYHHAGLTTEERDILESGFRQSYILVLVATST LSSGVNLPARRVIIRTPIFHRALIDLRVYQQMTGRAGRKGESDTGESILICRTNERNQAK LLTLSDIPPVKSCLVGKLQNKSTVRMERAVLEVIGSGLVSNIHEVMVYIQYSFLHAQLSS ETTSSQRRRRSSNHELKLLDDIVHTCVEWLVNNEFIYLQQCEEKGQSMSKKVMATQFGRA SLYSSLPTDQSLQVLADLQVASRAFALDSELHLIYQITPLNVLNDWLFIDWSQYLSIYEN LNGPHQRVAVLVGVEEGLLTRLASGGARGARFSTKLQQKITIHKRFYAALILQDILQEVP FTSICDKYDCNRGVIQALQQSAASFAGMVTSFCHELAWWCMELLFNEFQSRLLFGVQREL LDLTRIPLLNNKRARGLYLAGFTSCKLVAEANSSEVENILRNIHKFQSKKHLYGDNAWEV EERKKLHVIKIIGSTEGLTEAEAAVAIIAHAKVLSDAEGIGTYLSKSRLSTQTAHKATQP VNQTTQHVNHSTTNHFSQSINFPSNQAVNQTINQPVNQTTPNASHSTTGQFSQSITLPPN QPVNQSFNQPVNQSYNPSVNQTTPNSSHSTTGAFSQSINLPPNLCVNHSYNQSVNQSFNP SANQSYNSSVNQSFNLVLTPHTHDSQKLSDQSKVSNISISNVFSNYCATIEDSRVAHEIS RELSVSLCENNETHVVTKHSTPYVSRMSLDLFQTSFNDSVDQQKASPDMQVRKPKIPSWY TNIELKPGEKYKVFNIDHEKLSDFFHIWANETKFAFSVNVQTCTSEKDPKLVGLSLCWSP TVVYYLDIQILKTRHPSVIEDIQNIFESFDEDVIQIAFCIKDQFKWMLNSGVHGVTTSNN WQDPMIASWLMDPDNIKQDTKYDWDVNRPSYTSVSSEKVCCVESIASYILMLQLEEQLSG MNMWQHFTGVEMPHMYCVALLELNGIEVDNSLLKRYRLELHSASLALQEKAWKILGRKFN LSNPKEVSKVFSVL NT seq 4005 nt NT seq  +upstreamnt  +downstreamnt atggcaaatcaaaaactgcaagattggggtttaccagaatgcatacgaaacaattacact gcagttggtttaactgatatgttcgcatggcaggctgaatgtttatctttgcctggagtt ttagatggtaaaaatctgattgtttccgcacctaccagtgctggtaaaactcttattgtt gaaatactgatggcaaaaagagtttatggcacagggaaaaaagctttgctggtgtttcca tttgtatctctagcaagagaaaaaatgtttcatctgcgaaatatttttgacggtactgga ctaaatgttgatggttacatgggtggtatgtcgccacccggtggattttcatccgtagat attgcagtgtgtaccatcgagaaagcaaacagcattttaaacaaacttattgaagagaaa tccactgaacaacttggtatggtggtggtagatgagttacatatggtgggcgatgatggg agagggtacttgcttgaactactgcttactaagataaggtacttgaagacaaaggaaatt tcaataaaaactccaccatgccaaatcatagggttaagtgccacagttactaacttgggg ttatttgctacttggttggatggtttagtgtatgagacaaagttcagacccgtcccacta tcaagatatgtaaagattgggaaagaaatttttgatgagaagttaataaaatgtagagat tttcaacctcaagttacattcaatgaggatgatgacgacataactgcactatgttacgaa acaatctgcaataatcactccgttctattgttttgcccgactaaaaaatggtgcgaaaat ctcgcaaacttgatagcaagaaattttcaacaaattaatggcactaaaattgcaaccgct ggtcgagctggcatactggaacaattaagaagatctcctgccggtctcgatccattgttg catgcaactattcctattggggtggcttatcaccacgctggtttaaccacagaggaaagg gatatattagaatctggatttcgacaaagttatatccttgtgctggttgctacaagtact ttatcttcaggagtaaatcttccggcgagaagagtcattatccggactcctatcttccat cgagcgttgatcgatctcagagtttatcaacagatgacaggaagagctggaaggaaggga gagtctgatacgggagaaagtatattaatttgtcgcaccaatgaaagaaatcaagcgaaa ttattaacacttagcgatatacctccagtgaaaagttgcttggttgggaaactacaaaat aaatcaactgttagaatggaaagggcagtactagaggtcataggaagtggtttagttagc aatatacatgaagtgatggtttacatacaatattcatttcttcatgcgcagttgtcaagt gaaactacaagttcacaacgccgacgtaggtcatctaatcacgagttaaaactattagat gacatcgtacatacttgtgtggaatggctggtgaataatgaattcatttaccttcaacaa tgtgaagaaaaaggccaatcaatgtccaagaaagtgatggctacacaatttggtcgtgcc tcgttatattcatccttaccaaccgaccaatccttacaagtacttgctgatttacaagta gcttccagagcgtttgctttggattctgaactgcatttaatttatcagattacacccctg aatgtgttaaacgactggctatttattgattggtcacaatatttatcaatctacgagaat ttaaatggaccccaccagcgggtggcagtgttggttggtgtggaggaaggcttacttaca aggttggcatcgggtggcgctagaggtgcacggttttcaactaagctgcaacagaagatt acaatacataaaagattctatgcagctttaatattgcaagatatactccaagaagttcct ttcacatcaatatgtgataaatatgattgtaatcgtggcgtgatacaagcattgcaacaa tctgctgcatcatttgcaggcatggtaacttcattttgccacgaacttgcatggtggtgt atggagttattattcaatgaattccaatcaagactgttgtttggtgtacagcgtgaacta ctagatctaactaggataccattgttaaacaacaagagagcacgaggtttatacttagct ggcttcacttcatgtaaactagtggcggaagctaattcctcagaagtggaaaacatactg aggaacatacacaagtttcagagcaagaaacacctgtatggtgataatgcatgggaggta gaagaaagaaaaaaacttcatgtgattaaaataattggaagtaccgaaggattgacggag gcagaagctgctgttgccatcattgctcatgctaaagttttgtctgatgctgaaggtatt ggaacatatttgtccaaatctcgtctttctacacaaactgctcacaaagctacacaacct gtcaatcaaaccacccagcatgtcaatcattctactaccaaccactttagtcaatccatc aatttcccgtcaaaccaagctgtcaatcaaactataaaccaacctgtcaatcaaaccacc ccaaatgccagtcattctaccacaggtcaattcagtcagtctattaccctacccccaaac caacctgtcaatcaaagtttcaaccaacctgtcaatcaaagttacaacccatctgtcaat caaaccaccccaaatagcagtcattctactacgggtgcgttcagtcagtctattaaccta cccccaaacctatgtgtcaatcattcctacaaccaatctgtcaatcaaagtttcaaccca tctgccaatcaaagttacaactcatctgtcaatcaaagtttcaacctagtgttaacccca cacacccatgatagtcagaaactgagcgaccaaagtaaagtttcgaatatctcaatttcg aatgtgttttcgaattattgcgcaacaattgaagactcacgtgtggctcatgaaatctcc cgtgaattatctgtatcattatgtgaaaataatgaaactcatgttgtcaccaaacattca acaccttacgttagtagaatgtcattggatttatttcaaacaagtttcaacgactcggtt gaccaacaaaaagcttcaccagacatgcaggttagaaaaccaaagattccatcctggtat accaacattgaacttaaacctggtgaaaaatataaagtgtttaacattgatcacgaaaaa ctcagcgatttcttccatatttgggcaaatgagacaaagtttgcattttctgtaaatgtc caaacttgtacatctgaaaaagatcccaaacttgttggtttatccttatgttggtcaccc actgtggtttactatcttgatattcagattctcaaaacaagacaccccagtgtaatagaa gatattcaaaatatctttgaaagttttgatgaagacgttatacaaattgcgttttgtata aaagatcagtttaaatggatgttaaatagtggtgtacatggtgttactacgtcaaacaat tggcaggatcctatgatagctagttggctgatggatcctgacaacattaaacaagacaca aagtatgattgggatgtgaacagaccatcgtacaccagtgtttccagtgaaaaagtatgt tgcgttgaatcaatagcttcatatattcttatgttgcaactggaagaacaactttctggc atgaatatgtggcaacactttactggagttgagatgccacatatgtattgtgttgcactt ctagaactaaacggcatagaagtagataattcactgttaaaaagatataggttagaattg cactcggcatcactggctctgcaagaaaaagcttggaaaatcttaggaagaaaatttaat ctttcaaaccctaaagaagtttccaaggtattttccgttttgtaa

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