KEGG   Ciona intestinalis (yellow sea squirt): 100179535
Entry
100179535         CDS       T01056                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 26B
  KO
K18466  vacuolar protein sorting-associated protein 26A/B
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04142  Lysosome biogenesis
cin04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cin00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100179535
   04142 Lysosome biogenesis
    100179535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100179535
Membrane trafficking [BR:cin04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    100179535
SSDB
Motif
Pfam: Vps26 Arrestin_C Arrestin_N
Other DBs
NCBI-GeneID: 100179535
NCBI-ProteinID: XP_002128328
Ensembl: ENSCING00000012515
UniProt: A0A1W2WIN6
LinkDB
Position
3
AA seq 315 aa
MNFFGFGSGAEIEILLDGADKRKKVEHKISENKSEELSVYYDGETVSGAVSISLKPGGKL
EHKGIKIELIGQIEILYDRANQHDFATLTKQLASPGILNQSKVYAFEFPHVEKPYESYFG
SNVRLRYSLKVTVGRRLTDLNKELEFVVHTLSTYPDTNTSIKMEVGIEDCLHIEFEYNKQ
KYHLKDAIIGKIYFLLVRVKIKHMEMHVIKRETTGTGPSVYHDDDTVAKFEIMDGAPVKG
ESIPIRLFLGGYNLTPSMRDINRKFSVKYFLNLVLIDEEDRRYFKQQEIILWRKGDVPRR
QINSAIEESTQRFGA
NT seq 948 nt   +upstreamnt  +downstreamnt
atgaactttttcgggttcggctcgggtgctgaaatcgaaatacttctggacggagcagat
aaaaggaaaaaagtggaacacaaaatatcagaaaataaatccgaagaactttctgtatat
tatgatggtgaaacggtttctggtgctgtcagtatctcattgaaacctggtggtaaacta
gaacacaaaggaatcaaaatagaactaataggacagatagaaatattatacgaccgtgct
aaccaacacgactttgccacgctcaccaaacagcttgctagtcctggtattcttaaccaa
agcaaggtttatgctttcgaatttcctcatgtagagaaaccgtatgaatcttatttcggt
tcaaatgtgagactcaggtattccctgaaagtaacggtgggtagaagacttacagatctt
aacaaagaacttgaatttgtcgtccacacactgagtacttaccctgatacaaacacaagt
attaagatggaagttggaattgaagattgtcttcatattgaattcgaatacaacaaacaa
aagtatcacctcaaggatgctatcataggcaagatatacttccttcttgtgcgagtaaag
atcaaacatatggagatgcatgttataaagagagagaccaccggcactggtccaagtgtc
taccatgatgatgataccgttgcaaagtttgaaatcatggacggggcgcctgttaaagga
gaatcaattccgatccgtctcttcctcggaggttataaccttactccatcgatgcgggac
atcaatcggaagttttcagtcaaatattttcttaacctggttttaattgatgaggaagac
agaagatatttcaaacaacaggaaattatcttatggaggaaaggagacgtcccgcgtcgg
caaataaacagcgcgattgaagaatccacccaacggttcggcgcgtaa

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