Ciona intestinalis (yellow sea squirt): 100179545
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Entry
100179545 CDS
T01056
Name
(RefSeq) trafficking protein particle complex subunit 5-like isoform X2
KO
K20280
trafficking protein particle complex subunit 5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100179545
Membrane trafficking [BR:
cin04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
100179545
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
TRAPP complex I
100179545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPP
FCSD_central
GEMI5_RBS
Motif
Other DBs
NCBI-GeneID:
100179545
NCBI-ProteinID:
XP_002131823
Ensembl:
ENSCING00000008070
UniProt:
F6ZPU3
LinkDB
All DBs
Position
5:3274789..3281630
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AA seq
185 aa
AA seq
DB search
MDQSKRPRITILDKPTSRGKQEVSLSAFALLFSEMIQYSQNRVRSVAELQTKLSDFGFSV
GSRLVDLLIVREKGNKREIKVLNILLFIKVQLWKALFGKEADKLEQASDDDKIYYIIEKE
PVISTYISVPKDKGSLNCAAFAAGIVEAVLNFSNFPCKVTAHWHKGTTLMIKFDESVIAR
DKLVT
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaagcaaaagaccacgaataacaatcttggacaaaccgacaagtcgtggaaag
caagaagtttcactcagtgcatttgctcttctattcagtgagatgatacaatattcacag
aatagagttcggtcagtagctgaacttcagaccaagttatcagattttggattcagtgtt
ggttcacgccttgtagatttacttattgtacgagaaaaaggcaataaacgtgaaattaaa
gttttaaatattctcctgtttattaaggttcaactttggaaagctttgtttggtaaagaa
gctgacaaattagaacaagccagtgatgatgacaaaatttattacattattgaaaaagag
cccgtaatcagcacttatatttctgtcccgaaagacaaaggttctttaaactgtgcggcg
tttgcagctggtattgtggaagcagttcttaatttttcgaattttccatgcaaggtcact
gcacactggcataaaggtaccacacttatgatcaagtttgatgaatctgttatagcaaga
gacaaacttgtgacataa
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